Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   GII81_RS17335 Genome accession   NZ_CP045820
Coordinates   3301486..3302346 (-) Length   286 a.a.
NCBI ID   WP_040081966.1    Uniprot ID   C0JBM1
Organism   Bacillus subtilis strain MB9_B1     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3296486..3307346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII81_RS17300 (GII81_17300) mrpE 3296722..3297198 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  GII81_RS17305 (GII81_17305) mrpF 3297198..3297482 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  GII81_RS17310 (GII81_17310) mnhG 3297466..3297840 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  GII81_RS17315 (GII81_17315) yuxO 3297881..3298261 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  GII81_RS17320 (GII81_17320) comA 3298280..3298924 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  GII81_RS17325 (GII81_17325) comP 3299005..3301302 (-) 2298 WP_153912412.1 histidine kinase Regulator
  GII81_RS17330 (GII81_17330) comX 3301310..3301471 (-) 162 WP_049140565.1 competence pheromone ComX -
  GII81_RS17335 (GII81_17335) comQ 3301486..3302346 (-) 861 WP_040081966.1 polyprenyl synthetase family protein Regulator
  GII81_RS17340 (GII81_17340) degQ 3302531..3302671 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  GII81_RS17345 (GII81_17345) - 3302893..3303018 (+) 126 WP_003228793.1 hypothetical protein -
  GII81_RS17350 (GII81_17350) - 3303134..3303502 (+) 369 WP_119899729.1 hypothetical protein -
  GII81_RS17355 (GII81_17355) pdeH 3303478..3304707 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  GII81_RS17360 (GII81_17360) pncB 3304844..3306316 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  GII81_RS17365 (GII81_17365) pncA 3306332..3306883 (-) 552 WP_088326850.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32484.39 Da        Isoelectric Point: 4.7419

>NTDB_id=347307 GII81_RS17335 WP_040081966.1 3301486..3302346(-) (comQ) [Bacillus subtilis strain MB9_B1]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIEWLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIISQIDNDYKGLFYLNNDFVQKKNTLAYLYLKKQFNDASAELLSLYQKPEEFVSINTKALK
RKLTEAGVIQYLLVMKHLSLQKIKNEMSQLKLGEDKTEKLLSVMIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=347307 GII81_RS17335 WP_040081966.1 3301486..3302346(-) (comQ) [Bacillus subtilis strain MB9_B1]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATGGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCTTGTGTAATGGGAGTA
ATGTTGGCAACAGGCAAATATCATCCCATCGTAGCTTCTTATTCTTATGAACTTGGGATTATTTCACAGATCGATAATGA
TTATAAAGGTTTGTTTTACTTAAATAACGATTTTGTTCAGAAAAAAAATACATTGGCATACTTATACTTAAAGAAACAAT
TTAACGATGCTTCAGCGGAGCTACTAAGTTTATATCAAAAACCAGAGGAATTTGTTTCAATTAATACTAAGGCTTTGAAG
CGAAAATTGACAGAAGCAGGCGTTATACAATATTTACTGGTGATGAAACATTTATCTCTCCAAAAAATAAAAAATGAAAT
GTCACAATTAAAACTAGGAGAAGATAAAACTGAAAAATTATTGTCTGTTATGATTAAATAA

Domains


Predicted by InterProScan.

(40-229)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB C0JBM1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.84

98.252

0.441


Multiple sequence alignment