Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | EO087_RS15065 | Genome accession | NZ_CP035300 |
| Coordinates | 3284936..3285379 (-) | Length | 147 a.a. |
| NCBI ID | WP_128899580.1 | Uniprot ID | A0A410ULL4 |
| Organism | Dyella sp. M7H15-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3279936..3290379
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EO087_RS15055 (EO087_15055) | - | 3280868..3282844 (-) | 1977 | WP_128899578.1 | hypothetical protein | - |
| EO087_RS15060 (EO087_15060) | - | 3282841..3284373 (-) | 1533 | WP_240669069.1 | tetratricopeptide repeat protein | - |
| EO087_RS15065 (EO087_15065) | pilE | 3284936..3285379 (-) | 444 | WP_128899580.1 | pilin | Machinery gene |
| EO087_RS15070 (EO087_15070) | - | 3285790..3286230 (-) | 441 | WP_128899581.1 | pilin | - |
| EO087_RS15075 (EO087_15075) | - | 3286445..3287725 (-) | 1281 | WP_164931867.1 | glycosyltransferase family 39 protein | - |
| EO087_RS15080 (EO087_15080) | - | 3287889..3290027 (+) | 2139 | WP_128899583.1 | S9 family peptidase | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 15046.26 Da Isoelectric Point: 9.0355
>NTDB_id=339065 EO087_RS15065 WP_128899580.1 3284936..3285379(-) (pilE) [Dyella sp. M7H15-1]
MKKIQQGFTLIELMIVVAIIAILAAIAIPAYQNYLIRAQVSEGAVLADGAKTAVGEFFTNTGRLPGNNTSAGLAASTSIT
GKYVSSVTVAGTGITAAFSQAATNAAIYSDIFALSPITSAGSIVWHCGSTQTTVPQKYLPTSCRNGG
MKKIQQGFTLIELMIVVAIIAILAAIAIPAYQNYLIRAQVSEGAVLADGAKTAVGEFFTNTGRLPGNNTSAGLAASTSIT
GKYVSSVTVAGTGITAAFSQAATNAAIYSDIFALSPITSAGSIVWHCGSTQTTVPQKYLPTSCRNGG
Nucleotide
Download Length: 444 bp
>NTDB_id=339065 EO087_RS15065 WP_128899580.1 3284936..3285379(-) (pilE) [Dyella sp. M7H15-1]
ATGAAGAAAATCCAGCAGGGCTTCACCCTTATCGAACTGATGATCGTAGTTGCGATCATTGCCATCCTAGCGGCCATTGC
CATCCCGGCTTATCAGAACTACCTGATCCGCGCACAAGTTTCTGAAGGTGCGGTGCTAGCCGATGGCGCCAAGACGGCTG
TAGGCGAGTTCTTTACCAATACGGGCCGCCTGCCAGGCAACAACACCTCTGCTGGTCTCGCGGCGTCCACCAGCATCACC
GGTAAGTACGTCAGCTCCGTTACAGTCGCCGGCACCGGAATCACCGCAGCCTTCAGTCAGGCCGCCACCAACGCTGCCAT
CTATAGTGACATTTTTGCGCTGTCGCCCATTACCAGTGCGGGCAGCATCGTTTGGCACTGCGGCAGCACCCAAACCACCG
TTCCCCAGAAGTACCTGCCCACTAGCTGCCGTAACGGCGGCTGA
ATGAAGAAAATCCAGCAGGGCTTCACCCTTATCGAACTGATGATCGTAGTTGCGATCATTGCCATCCTAGCGGCCATTGC
CATCCCGGCTTATCAGAACTACCTGATCCGCGCACAAGTTTCTGAAGGTGCGGTGCTAGCCGATGGCGCCAAGACGGCTG
TAGGCGAGTTCTTTACCAATACGGGCCGCCTGCCAGGCAACAACACCTCTGCTGGTCTCGCGGCGTCCACCAGCATCACC
GGTAAGTACGTCAGCTCCGTTACAGTCGCCGGCACCGGAATCACCGCAGCCTTCAGTCAGGCCGCCACCAACGCTGCCAT
CTATAGTGACATTTTTGCGCTGTCGCCCATTACCAGTGCGGGCAGCATCGTTTGGCACTGCGGCAGCACCCAAACCACCG
TTCCCCAGAAGTACCTGCCCACTAGCTGCCGTAACGGCGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
44.375 |
100 |
0.483 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
44.025 |
100 |
0.476 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
35.979 |
100 |
0.463 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
39.759 |
100 |
0.449 |
| pilA2 | Legionella pneumophila str. Paris |
45.775 |
96.599 |
0.442 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
45.775 |
96.599 |
0.442 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.422 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.961 |
100 |
0.408 |
| pilA | Acinetobacter baumannii strain A118 |
39.161 |
97.279 |
0.381 |
| pilA | Pseudomonas aeruginosa PAK |
35.526 |
100 |
0.367 |