Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | EQH15_RS08940 | Genome accession | NZ_CP035265 |
| Coordinates | 1742318..1742713 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain TVO_1901920 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1737318..1747713
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH15_RS08915 (EQH15_09380) | - | 1737777..1738115 (-) | 339 | WP_001812522.1 | helix-turn-helix transcriptional regulator | - |
| EQH15_RS08920 (EQH15_09385) | - | 1738128..1738901 (-) | 774 | WP_000566048.1 | class I SAM-dependent methyltransferase | - |
| EQH15_RS08925 (EQH15_09390) | - | 1739347..1740102 (-) | 756 | Protein_1765 | epoxyqueuosine reductase QueH | - |
| EQH15_RS08930 (EQH15_09395) | groL | 1740240..1741862 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| EQH15_RS08935 (EQH15_09400) | groES | 1741878..1742162 (-) | 285 | WP_000917339.1 | co-chaperone GroES | - |
| EQH15_RS08940 (EQH15_09405) | ssbB/cilA | 1742318..1742713 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| EQH15_RS08945 (EQH15_09410) | - | 1742791..1743552 (-) | 762 | WP_001107746.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| EQH15_RS08950 (EQH15_09415) | ytpR | 1743585..1744211 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| EQH15_RS08955 (EQH15_09420) | - | 1744227..1744544 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| EQH15_RS08960 (EQH15_09425) | - | 1744541..1744840 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| EQH15_RS10865 | - | 1744934..1745065 (+) | 132 | WP_001823606.1 | hypothetical protein | - |
| EQH15_RS08965 | - | 1745090..1745152 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| EQH15_RS08970 (EQH15_09430) | - | 1745177..1745368 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| EQH15_RS08975 (EQH15_09435) | - | 1745529..1746203 (-) | 675 | WP_000725756.1 | LiaF transmembrane domain-containing protein | - |
| EQH15_RS08980 (EQH15_09440) | - | 1746208..1746654 (-) | 447 | WP_000776580.1 | LytTR family DNA-binding domain-containing protein | - |
| EQH15_RS08985 (EQH15_09445) | - | 1746768..1747271 (-) | 504 | WP_000800946.1 | phosphatase PAP2 family protein | - |
| EQH15_RS08990 (EQH15_09450) | - | 1747268..1747630 (-) | 363 | WP_000078806.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=338712 EQH15_RS08940 WP_000282467.1 1742318..1742713(-) (ssbB/cilA) [Streptococcus pneumoniae strain TVO_1901920]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=338712 EQH15_RS08940 WP_000282467.1 1742318..1742713(-) (ssbB/cilA) [Streptococcus pneumoniae strain TVO_1901920]
ATGTATAATAAAGTTATCATGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |