Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | EQH17_RS08810 | Genome accession | NZ_CP035263 |
| Coordinates | 1774186..1774581 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain TVO_1901922 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1769186..1779581
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQH17_RS08785 (EQH17_09315) | - | 1769335..1769868 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| EQH17_RS08790 (EQH17_09320) | - | 1770222..1770428 (-) | 207 | WP_000768520.1 | transcriptional regulator | - |
| EQH17_RS08795 (EQH17_09325) | - | 1770589..1771895 (+) | 1307 | Protein_1743 | transposase | - |
| EQH17_RS08800 (EQH17_09330) | groL | 1771994..1773616 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| EQH17_RS08805 (EQH17_09335) | groES | 1773632..1773916 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| EQH17_RS08810 (EQH17_09340) | ssbB/cilA | 1774186..1774581 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| EQH17_RS08815 (EQH17_09345) | - | 1774659..1775420 (-) | 762 | WP_001107758.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| EQH17_RS08820 (EQH17_09350) | ytpR | 1775453..1776079 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| EQH17_RS08825 (EQH17_09355) | - | 1776095..1776412 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| EQH17_RS08830 (EQH17_09360) | - | 1776409..1776708 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| EQH17_RS10950 | - | 1776802..1776933 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| EQH17_RS08835 | - | 1776958..1777020 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| EQH17_RS08840 (EQH17_09365) | - | 1777045..1777236 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| EQH17_RS08845 (EQH17_09370) | - | 1777397..1778071 (-) | 675 | WP_000725742.1 | LiaF transmembrane domain-containing protein | - |
| EQH17_RS08850 (EQH17_09375) | - | 1778077..1778523 (-) | 447 | WP_000776587.1 | LytTR family DNA-binding domain-containing protein | - |
| EQH17_RS08855 (EQH17_09380) | - | 1778637..1779140 (-) | 504 | WP_000800947.1 | phosphatase PAP2 family protein | - |
| EQH17_RS08860 (EQH17_09385) | - | 1779137..1779499 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=338555 EQH17_RS08810 WP_000282467.1 1774186..1774581(-) (ssbB/cilA) [Streptococcus pneumoniae strain TVO_1901922]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=338555 EQH17_RS08810 WP_000282467.1 1774186..1774581(-) (ssbB/cilA) [Streptococcus pneumoniae strain TVO_1901922]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |