Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   FYA21_RS05070 Genome accession   NZ_CP043180
Coordinates   1041422..1042057 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain PG20180064     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1036422..1047057
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FYA21_RS05055 (FYA21_05055) - 1037209..1038393 (+) 1185 WP_000939110.1 S41 family peptidase -
  FYA21_RS05060 (FYA21_05060) - 1038397..1039818 (-) 1422 WP_096641157.1 sigma-54-dependent transcriptional regulator -
  FYA21_RS05065 (FYA21_05065) pilS 1039843..1041411 (-) 1569 WP_213062600.1 sensor histidine kinase Regulator
  FYA21_RS05070 (FYA21_05070) letA 1041422..1042057 (-) 636 WP_000633799.1 response regulator Regulator
  FYA21_RS05075 (FYA21_05075) pbpG 1042270..1043316 (+) 1047 WP_003384760.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  FYA21_RS05080 (FYA21_05080) thrC 1043424..1044563 (-) 1140 WP_000063593.1 threonine synthase -
  FYA21_RS05085 (FYA21_05085) - 1044619..1045920 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  FYA21_RS05090 (FYA21_05090) - 1046165..1046980 (-) 816 WP_096641159.1 DsbC family protein -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=334339 FYA21_RS05070 WP_000633799.1 1041422..1042057(-) (letA) [Acinetobacter baumannii strain PG20180064]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=334339 FYA21_RS05070 WP_000633799.1 1041422..1042057(-) (letA) [Acinetobacter baumannii strain PG20180064]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAACCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment