Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | SP70585_RS09880 | Genome accession | NC_012468 |
| Coordinates | 1836019..1836414 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae 70585 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1831019..1841414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SP70585_RS09855 (SP70585_1983) | recX | 1831096..1831872 (+) | 777 | WP_000705089.1 | recombination regulator RecX | - |
| SP70585_RS09860 (SP70585_1984) | - | 1831961..1832494 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| SP70585_RS09865 | - | 1832934..1833689 (-) | 756 | Protein_1867 | epoxyqueuosine reductase QueH | - |
| SP70585_RS09870 (SP70585_1987) | groL | 1833827..1835449 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| SP70585_RS09875 (SP70585_1988) | groES | 1835465..1835749 (-) | 285 | WP_000917331.1 | co-chaperone GroES | - |
| SP70585_RS09880 (SP70585_1989) | ssbB/cilA | 1836019..1836414 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| SP70585_RS09885 (SP70585_1990) | - | 1836492..1837253 (-) | 762 | WP_001107743.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| SP70585_RS09890 (SP70585_1991) | ytpR | 1837286..1837912 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| SP70585_RS09895 (SP70585_1992) | - | 1837928..1838245 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| SP70585_RS09900 (SP70585_1993) | - | 1838242..1838541 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| SP70585_RS14035 | - | 1838739..1838819 (-) | 81 | WP_223200442.1 | hypothetical protein | - |
| SP70585_RS09905 (SP70585_1994) | - | 1838826..1839017 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| SP70585_RS09910 (SP70585_1995) | - | 1839178..1839852 (-) | 675 | WP_000725719.1 | LiaF transmembrane domain-containing protein | - |
| SP70585_RS09915 (SP70585_1996) | - | 1839857..1840303 (-) | 447 | WP_000776596.1 | LytTR family DNA-binding domain-containing protein | - |
| SP70585_RS09920 (SP70585_1997) | - | 1840417..1840920 (-) | 504 | WP_000800945.1 | phosphatase PAP2 family protein | - |
| SP70585_RS09925 (SP70585_1998) | - | 1840917..1841279 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=33327 SP70585_RS09880 WP_000282467.1 1836019..1836414(-) (ssbB/cilA) [Streptococcus pneumoniae 70585]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=33327 SP70585_RS09880 WP_000282467.1 1836019..1836414(-) (ssbB/cilA) [Streptococcus pneumoniae 70585]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |