Detailed information
Bioinformatically predicted
Overview
| Name | comYC | Type | Machinery gene |
| Locus tag | EGX73_RS06725 | Genome accession | NZ_CP033740 |
| Coordinates | 1295596..1295871 (+) | Length | 91 a.a. |
| NCBI ID | WP_029487321.1 | Uniprot ID | - |
| Organism | Enterococcus sp. FDAARGOS_553 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1290596..1300871
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX73_RS06700 (EGX73_06735) | - | 1290729..1291940 (+) | 1212 | WP_029487323.1 | ABC transporter permease | - |
| EGX73_RS06705 (EGX73_06740) | - | 1292045..1292824 (+) | 780 | WP_003128432.1 | phosphotransferase family protein | - |
| EGX73_RS06710 (EGX73_06745) | trmB | 1292878..1293540 (+) | 663 | WP_003128433.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| EGX73_RS06715 (EGX73_06750) | comGA | 1293652..1294593 (+) | 942 | WP_005472888.1 | competence type IV pilus ATPase ComGA | - |
| EGX73_RS06720 (EGX73_06755) | comGB | 1294568..1295599 (+) | 1032 | WP_005472886.1 | competence type IV pilus assembly protein ComGB | - |
| EGX73_RS06725 (EGX73_06760) | comYC | 1295596..1295871 (+) | 276 | WP_029487321.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| EGX73_RS06730 (EGX73_06765) | comGD | 1295840..1296319 (+) | 480 | WP_123866834.1 | competence type IV pilus minor pilin ComGD | - |
| EGX73_RS06735 (EGX73_06770) | - | 1296330..1296611 (+) | 282 | WP_005472881.1 | hypothetical protein | - |
| EGX73_RS06740 (EGX73_06775) | comGF | 1296601..1297014 (+) | 414 | WP_003128440.1 | competence type IV pilus minor pilin ComGF | - |
| EGX73_RS06745 (EGX73_06780) | comGG | 1297037..1297342 (+) | 306 | WP_238581784.1 | competence type IV pilus minor pilin ComGG | - |
| EGX73_RS06750 (EGX73_06785) | - | 1297517..1298524 (+) | 1008 | WP_003128442.1 | class I SAM-dependent methyltransferase | - |
| EGX73_RS06755 (EGX73_06790) | - | 1298549..1299733 (+) | 1185 | WP_003128443.1 | acetate/propionate family kinase | - |
| EGX73_RS06760 (EGX73_06795) | - | 1299947..1300258 (-) | 312 | WP_005472877.1 | DUF1048 domain-containing protein | - |
| EGX73_RS06765 (EGX73_06800) | - | 1300268..1300609 (-) | 342 | WP_003128445.1 | DUF1048 domain-containing protein | - |
Sequence
Protein
Download Length: 91 a.a. Molecular weight: 10464.26 Da Isoelectric Point: 6.4633
>NTDB_id=325319 EGX73_RS06725 WP_029487321.1 1295596..1295871(+) (comYC) [Enterococcus sp. FDAARGOS_553]
MRKLKHQGFTLVEMLIVLLVISILILLFVPNLSAQRTVIDEKGNAAIVKVVETQIELFQLNENRTPTRQELLAGNYVTEE
QYAIYLAHRNE
MRKLKHQGFTLVEMLIVLLVISILILLFVPNLSAQRTVIDEKGNAAIVKVVETQIELFQLNENRTPTRQELLAGNYVTEE
QYAIYLAHRNE
Nucleotide
Download Length: 276 bp
>NTDB_id=325319 EGX73_RS06725 WP_029487321.1 1295596..1295871(+) (comYC) [Enterococcus sp. FDAARGOS_553]
ATGAGAAAATTGAAGCATCAAGGGTTCACATTGGTGGAGATGCTGATTGTACTGTTAGTGATCAGTATTTTGATTTTATT
GTTTGTACCAAACTTATCCGCACAACGTACAGTGATAGATGAGAAAGGAAATGCGGCAATCGTCAAAGTCGTAGAAACCC
AGATTGAGTTGTTCCAGCTTAATGAGAATCGAACACCTACTCGACAAGAATTACTAGCTGGAAATTATGTAACGGAGGAG
CAGTATGCGATTTACCTTGCCCATCGGAACGAATAG
ATGAGAAAATTGAAGCATCAAGGGTTCACATTGGTGGAGATGCTGATTGTACTGTTAGTGATCAGTATTTTGATTTTATT
GTTTGTACCAAACTTATCCGCACAACGTACAGTGATAGATGAGAAAGGAAATGCGGCAATCGTCAAAGTCGTAGAAACCC
AGATTGAGTTGTTCCAGCTTAATGAGAATCGAACACCTACTCGACAAGAATTACTAGCTGGAAATTATGTAACGGAGGAG
CAGTATGCGATTTACCTTGCCCATCGGAACGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYC | Streptococcus suis isolate S10 |
51.613 |
100 |
0.527 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
50.538 |
100 |
0.516 |
| comYC | Streptococcus mutans UA159 |
48.387 |
100 |
0.495 |
| comYC | Streptococcus mutans UA140 |
48.387 |
100 |
0.495 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
48.352 |
100 |
0.484 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
48.352 |
100 |
0.484 |
| comGC/cglC | Streptococcus pneumoniae D39 |
48.352 |
100 |
0.484 |
| comGC/cglC | Streptococcus pneumoniae R6 |
48.352 |
100 |
0.484 |
| comGC/cglC | Streptococcus mitis SK321 |
51.765 |
93.407 |
0.484 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
50 |
96.703 |
0.484 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
48.315 |
97.802 |
0.473 |
| comGC | Staphylococcus aureus MW2 |
44.872 |
85.714 |
0.385 |
| comGC | Staphylococcus aureus N315 |
44.872 |
85.714 |
0.385 |