Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | SPCG_RS09870 | Genome accession | NC_010582 |
| Coordinates | 1874178..1874573 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae CGSP14 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1869178..1879573
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPCG_RS09845 (SPCG_1878) | - | 1869401..1869934 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| SPCG_RS13170 (SPCG_1879) | - | 1870291..1870497 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| SPCG_RS09855 (SPCG_1880) | - | 1870657..1871886 (+) | 1230 | WP_000436406.1 | ISL3 family transposase | - |
| SPCG_RS09860 (SPCG_1881) | groL | 1871986..1873608 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| SPCG_RS09865 (SPCG_1882) | groES | 1873624..1873908 (-) | 285 | WP_000917343.1 | co-chaperone GroES | - |
| SPCG_RS09870 (SPCG_1883) | ssbB/cilA | 1874178..1874573 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| SPCG_RS09875 (SPCG_1884) | - | 1874650..1875411 (-) | 762 | WP_001107755.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| SPCG_RS09880 (SPCG_1885) | ytpR | 1875444..1876070 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| SPCG_RS09885 (SPCG_1886) | - | 1876086..1876403 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| SPCG_RS09890 (SPCG_1887) | - | 1876400..1876699 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| SPCG_RS14070 | - | 1876793..1876924 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| SPCG_RS13925 | - | 1876949..1877029 (-) | 81 | WP_223200442.1 | hypothetical protein | - |
| SPCG_RS09900 (SPCG_1888) | - | 1877036..1877227 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| SPCG_RS09905 (SPCG_1889) | - | 1877388..1878062 (-) | 675 | WP_000725742.1 | LiaF transmembrane domain-containing protein | - |
| SPCG_RS09910 (SPCG_1890) | - | 1878068..1878514 (-) | 447 | WP_000776587.1 | LytTR family DNA-binding domain-containing protein | - |
| SPCG_RS09915 (SPCG_1891) | - | 1878628..1879131 (-) | 504 | WP_000800947.1 | phosphatase PAP2 family protein | - |
| SPCG_RS09920 (SPCG_1892) | - | 1879128..1879490 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=30634 SPCG_RS09870 WP_000282467.1 1874178..1874573(-) (ssbB/cilA) [Streptococcus pneumoniae CGSP14]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=30634 SPCG_RS09870 WP_000282467.1 1874178..1874573(-) (ssbB/cilA) [Streptococcus pneumoniae CGSP14]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |