Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | DV129_RS09920 | Genome accession | NZ_CP031247 |
| Coordinates | 1812723..1813118 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain M23734 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1807723..1818118
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV129_RS09870 | - | 1807858..1808220 (+) | 363 | WP_000078810.1 | DUF2200 domain-containing protein | - |
| DV129_RS09875 | - | 1808217..1808720 (+) | 504 | WP_000800925.1 | phosphatase PAP2 family protein | - |
| DV129_RS09880 | - | 1808834..1809280 (+) | 447 | WP_000776596.1 | LytTR family DNA-binding domain-containing protein | - |
| DV129_RS09885 | - | 1809285..1809959 (+) | 675 | WP_000725719.1 | hypothetical protein | - |
| DV129_RS09890 | - | 1810120..1810311 (+) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| DV129_RS12405 | - | 1810336..1810398 (+) | 63 | WP_219300018.1 | hypothetical protein | - |
| DV129_RS09900 | - | 1810596..1810895 (+) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| DV129_RS09905 | - | 1810892..1811209 (+) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| DV129_RS09910 | ytpR | 1811225..1811851 (+) | 627 | WP_000578316.1 | YtpR family tRNA-binding protein | - |
| DV129_RS09915 | - | 1811884..1812645 (+) | 762 | WP_000240515.1 | SDR family oxidoreductase | - |
| DV129_RS09920 | ssbB/cilA | 1812723..1813118 (+) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| DV129_RS09925 | groES | 1813388..1813672 (+) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| DV129_RS09930 | groL | 1813688..1815310 (+) | 1623 | WP_000031577.1 | chaperonin GroEL | - |
| DV129_RS12000 | - | 1815448..1816203 (+) | 756 | Protein_1841 | epoxyqueuosine reductase QueH | - |
| DV129_RS09950 | - | 1816644..1817177 (-) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| DV129_RS09955 | recX | 1817266..1818042 (-) | 777 | WP_000705069.1 | recombination regulator RecX | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=304807 DV129_RS09920 WP_000282467.1 1812723..1813118(+) (ssbB/cilA) [Streptococcus pneumoniae strain M23734]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=304807 DV129_RS09920 WP_000282467.1 1812723..1813118(+) (ssbB/cilA) [Streptococcus pneumoniae strain M23734]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |