Detailed information NTG0304792

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: DV129_RS09145
• Genome accession: NZ_CP031247
• Coordinates: 1690044..1690448 (+)
• Length: 134 a.a.
• NCBI ID: WP_000588020.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain M23734
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1685044..1695448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV129_RS09120	-	1686168..1687226 (+)	1059	WP_000649471.1	zinc-dependent alcohol dehydrogenase family protein	-
DV129_RS09125	-	1687377..1687742 (+)	366	WP_000286415.1	DUF1033 family protein	-
DV129_RS09130	comGA/cglA/cilD	1687818..1688759 (+)	942	WP_000249571.1	competence type IV pilus ATPase ComGA	Machinery gene
DV129_RS09135	comGB/cglB	1688707..1689723 (+)	1017	WP_001844679.1	competence type IV pilus assembly protein ComGB	Machinery gene
DV129_RS09140	comGC/cglC	1689725..1690051 (+)	327	WP_000738633.1	comG operon protein ComGC	Machinery gene
DV129_RS09145	comGD/cglD	1690044..1690448 (+)	405	WP_000588020.1	competence type IV pilus minor pilin ComGD	Machinery gene
DV129_RS09150	comGE/cglE	1690411..1690713 (+)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
DV129_RS09155	comGF/cglF	1690676..1691137 (+)	462	WP_000250531.1	competence type IV pilus minor pilin ComGF	Machinery gene
DV129_RS09160	comGG/cglG	1691115..1691528 (+)	414	WP_000265631.1	competence type IV pilus minor pilin ComGG	Machinery gene
DV129_RS09170	-	1691665..1692259 (+)	595	Protein_1712	methyltransferase domain-containing protein	-
DV129_RS09175	comYH	1692320..1693273 (+)	954	WP_000345116.1	class I SAM-dependent methyltransferase	Machinery gene
DV129_RS09180	-	1693324..1694514 (+)	1191	WP_000167766.1	acetate kinase	-
DV129_RS12550	-	1694515..1694646 (+)	132	WP_000768904.1	hypothetical protein	-
DV129_RS09185	rnpA	1694663..1695034 (+)	372	WP_000739246.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14662.89 Da
• Isoelectric Point: 10.2164

>NTDB_id=304792 DV129_RS09145 WP_000588020.1 1690044..1690448(+) (comGD/cglD) [Streptococcus pneumoniae strain M23734]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTISNGSQKLPV
PKGIQVPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=304792 DV129_RS09145 WP_000588020.1 1690044..1690448(+) (comGD/cglD) [Streptococcus pneumoniae strain M23734]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTGTCCGGCTC
TGTTCAGTCCACTTTTGCGGCAGTAGAGGAACAGATTTTCTTTATGGAATTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTGAACTTAGATGGGCAGACGATTAGCAATGGCAGTCAAAAGTTGCCAGTC
CCTAAAGGAATTCAGGTCCCATCAGGCCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	59.055	94.776	0.56
comYD	Streptococcus mutans UA140	50	95.522	0.478
comYD	Streptococcus mutans UA159	50	95.522	0.478