Detailed information NTG0302974

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: DUN60_RS12970
• Genome accession: NZ_CP031055
• Coordinates: 2903213..2904931 (-)
• Length: 572 a.a.
• NCBI ID: WP_054542267.1
• Uniprot ID: -
• Organism: Vibrio splendidus strain Vibrio sp
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2898213..2909931

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DUN60_RS12950	-	2898890..2899738 (-)	849	WP_065207402.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	-
DUN60_RS12955	-	2899808..2901325 (-)	1518	WP_114634065.1	AAA family ATPase	-
DUN60_RS12960	aroB	2901405..2902493 (-)	1089	WP_114634066.1	3-dehydroquinate synthase	-
DUN60_RS12965	aroK	2902518..2903036 (-)	519	WP_004729664.1	shikimate kinase AroK	-
DUN60_RS12970	pilQ	2903213..2904931 (-)	1719	WP_054542267.1	type IV pilus secretin PilQ family protein	Machinery gene
DUN60_RS12975	pilP	2904967..2905485 (-)	519	WP_114634067.1	pilus assembly protein PilP	Machinery gene
DUN60_RS12980	pilO	2905472..2906101 (-)	630	WP_004729667.1	type 4a pilus biogenesis protein PilO	Machinery gene
DUN60_RS12985	pilN	2906094..2906693 (-)	600	WP_114634068.1	PilN domain-containing protein	Machinery gene
DUN60_RS12990	pilM	2906677..2907702 (-)	1026	WP_114634069.1	type IV pilus assembly protein PilM	Machinery gene

Sequence

Protein

• Length: 572 a.a.
• Molecular weight: 62032.78 Da
• Isoelectric Point: 4.4494

>NTDB_id=302974 DUN60_RS12970 WP_054542267.1 2903213..2904931(-) (pilQ) [Vibrio splendidus strain Vibrio sp]
MIKGISGLVSKALQGFAVSVMLVFSVLSHAESLPNQLENIDFRVNKDKDAVIIIELATSTAVVDVQRAQEGLSIELLNTQ
VNDDKLYLLDVKDFATLVEGIEVYKETSSTRLLATIAGDYQYEYNLKGRFIEVVISKPVINEATKEKSVLEKEGKLISIN
FQDIPVRNVLQLIADYNDFNLVVSDSVAGNLTLRLDGVPWQQVLDIILQVKGLDKRVDGNVILVAPKAELDLREQQALEK
SRLEEELGELKSEIIKINFAKATDIADMIGGEGAVSMLSDRGSITIDERTNSLLIRELEENIAVIRGIIESLDIPVKQVQ
IEARIVTVTEGNLDELGVRWGVSSTNGSFKVGGSIEGNHPSQITPYDDNGGNSAIDDFLNVNLGATSPNASSIAFQVAKL
GSDTLLDLELSALQQESKAEIISSPRLITTNKKPAYIEQGTEIPYLESSSSGATSVAFKKAVLSLKVTPQITPDNRLVLD
LSVTQDRPGQVVKTGTGEAVAIDTQRIGTQVLVNNGETVVLGGIFQHSVSSTVDKVPLLGDLPVLGALFRRSYENVGKSE
LLIFVTPKVVIQ

Nucleotide

• Length: 1719 bp

>NTDB_id=302974 DUN60_RS12970 WP_054542267.1 2903213..2904931(-) (pilQ) [Vibrio splendidus strain Vibrio sp]
ATGATTAAAGGAATAAGTGGATTAGTGAGCAAGGCTCTACAAGGTTTTGCTGTGTCTGTGATGTTGGTCTTTAGTGTGCT
CAGTCACGCCGAGAGCTTACCTAATCAATTGGAGAATATTGATTTTAGGGTAAACAAAGATAAAGACGCCGTCATTATTA
TTGAGCTGGCAACCAGCACCGCTGTGGTGGATGTTCAACGTGCTCAGGAAGGGTTAAGTATCGAATTACTCAATACTCAA
GTTAATGACGATAAGCTTTATCTTTTGGATGTGAAGGATTTCGCGACCCTAGTGGAAGGTATTGAAGTCTATAAAGAGAC
GTCCAGCACACGACTGTTGGCGACGATCGCTGGTGACTATCAGTATGAATATAACCTAAAAGGTCGTTTCATAGAGGTGG
TGATCAGCAAGCCTGTTATCAATGAAGCGACCAAAGAGAAAAGCGTTTTAGAAAAAGAGGGCAAACTGATATCGATTAAC
TTCCAAGATATCCCGGTACGAAATGTCCTGCAGCTGATTGCTGACTACAACGATTTCAATCTAGTGGTGTCTGACTCGGT
AGCGGGTAACCTAACTTTACGTTTAGATGGCGTACCTTGGCAGCAAGTTCTCGACATTATCTTGCAAGTTAAAGGGCTAG
ATAAGCGCGTTGATGGCAATGTTATTTTGGTGGCGCCAAAAGCAGAACTCGATCTTCGAGAGCAACAAGCGTTAGAGAAA
TCTCGCTTGGAAGAGGAGTTAGGGGAGCTTAAGTCGGAAATCATCAAGATTAATTTTGCTAAAGCCACCGACATTGCCGA
CATGATTGGCGGTGAAGGTGCGGTAAGTATGCTGTCTGACCGCGGTTCGATTACCATTGATGAGAGAACCAACTCACTGC
TCATTCGTGAATTGGAAGAAAACATTGCGGTGATACGAGGCATCATTGAATCGCTAGACATTCCCGTGAAGCAAGTACAG
ATAGAAGCGCGCATCGTAACCGTTACCGAGGGTAACCTTGATGAGTTAGGGGTGCGTTGGGGTGTTTCTTCCACCAACGG
TAGCTTTAAAGTTGGCGGCTCGATAGAGGGCAACCACCCATCGCAAATTACGCCGTATGACGATAATGGTGGGAATAGTG
CGATTGACGATTTCCTCAACGTTAATCTAGGGGCGACATCTCCTAATGCATCAAGCATTGCGTTTCAGGTGGCCAAACTG
GGTTCAGATACCTTGCTTGATCTTGAATTGTCGGCATTACAACAAGAGTCAAAAGCTGAGATTATTTCCAGCCCACGTTT
AATCACCACCAATAAAAAGCCCGCTTATATTGAGCAAGGTACTGAAATTCCTTATTTAGAGTCGTCTTCAAGTGGTGCTA
CTTCGGTCGCATTTAAGAAAGCAGTGTTGAGTCTTAAGGTGACACCACAAATCACGCCCGACAATCGTTTGGTATTGGAT
TTAAGCGTGACGCAAGATAGGCCAGGGCAAGTAGTGAAAACAGGAACGGGTGAGGCTGTTGCCATTGATACTCAACGCAT
AGGGACGCAAGTGCTTGTTAATAATGGTGAAACAGTCGTGCTTGGCGGGATATTTCAACACAGTGTGAGCAGTACAGTGG
ACAAAGTTCCTCTGTTAGGAGACCTGCCAGTTTTGGGTGCATTATTCCGTCGTAGCTATGAAAATGTGGGTAAAAGTGAA
CTACTTATTTTTGTTACACCCAAAGTTGTGATTCAGTAA

Domains

Predicted by InterproScan.

• Bacterial type II/III secretion system short domain (Secretin_N) (253-318)

• Bacterial type II and III secretion system protein (Secretin) (412-570)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Vibrio cholerae strain A1552	77.875	100	0.781
pilQ	Vibrio cholerae O1 biovar El Tor strain E7946	77.875	100	0.781
pilQ	Vibrio campbellii strain DS40M4	81.066	95.105	0.771
pilQ	Legionella pneumophila strain Lp02	43.04	95.455	0.411
pilQ	Legionella pneumophila strain ERS1305867	43.04	95.455	0.411
pilQ	Pseudomonas aeruginosa PAK	41.145	97.727	0.402
comQ	Acinetobacter baylyi ADP1	39.965	99.301	0.397
pilQ	Acinetobacter baumannii D1279779	37.824	100	0.383
pilQ	Acinetobacter baumannii strain A118	37.824	100	0.383