Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | SPH_RS10025 | Genome accession | NC_010380 |
| Coordinates | 1893555..1893950 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae Hungary19A-6 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1888555..1898950
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPH_RS09990 (SPH_2045) | - | 1888693..1889226 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| SPH_RS13655 (SPH_2046) | - | 1889581..1889787 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| SPH_RS12890 | - | 1889947..1891264 (+) | 1318 | Protein_1896 | ISL3 family transposase | - |
| SPH_RS10015 (SPH_2050) | groL | 1891363..1892985 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| SPH_RS10020 (SPH_2051) | groES | 1893001..1893285 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| SPH_RS10025 (SPH_2052) | ssbB/cilA | 1893555..1893950 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| SPH_RS10030 (SPH_2053) | - | 1894027..1894788 (-) | 762 | WP_001107757.1 | SDR family oxidoreductase | - |
| SPH_RS10035 (SPH_2054) | ytpR | 1894821..1895450 (-) | 630 | WP_000578314.1 | YtpR family tRNA-binding protein | - |
| SPH_RS10040 (SPH_2055) | - | 1895466..1895783 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| SPH_RS10045 (SPH_2056) | - | 1895780..1896079 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| SPH_RS14080 | - | 1896317..1896397 (-) | 81 | WP_223200442.1 | hypothetical protein | - |
| SPH_RS14085 | - | 1896404..1896549 (-) | 146 | Protein_1905 | cell wall-binding protein | - |
| SPH_RS10055 (SPH_2057) | - | 1896761..1897435 (-) | 675 | WP_000725722.1 | membrane protein | - |
| SPH_RS10060 (SPH_2058) | - | 1897441..1897887 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| SPH_RS10065 (SPH_2059) | - | 1898001..1898504 (-) | 504 | WP_000800939.1 | phosphatase PAP2 family protein | - |
| SPH_RS10070 (SPH_2060) | - | 1898501..1898863 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=30031 SPH_RS10025 WP_000282467.1 1893555..1893950(-) (ssbB/cilA) [Streptococcus pneumoniae Hungary19A-6]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=30031 SPH_RS10025 WP_000282467.1 1893555..1893950(-) (ssbB/cilA) [Streptococcus pneumoniae Hungary19A-6]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |