Detailed information NTG0297010

Bioinformatically predicted

Overview

• Name: comGC/cglC
• Type: Machinery gene
• Locus tag: EQH24_RS10215
• Genome accession: NZ_CP035256
• Coordinates: 1967895..1968161 (-)
• Length: 88 a.a.
• NCBI ID: WP_050129046.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901930
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1962895..1973161

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH24_RS10175 (EQH24_10700)	rnpA	1962912..1963283 (-)	372	WP_000739244.1	ribonuclease P protein component	-
EQH24_RS11675	-	1963300..1963431 (-)	132	WP_000768904.1	hypothetical protein	-
EQH24_RS10180 (EQH24_10705)	-	1963432..1964622 (-)	1191	WP_000167753.1	acetate kinase	-
EQH24_RS10185 (EQH24_10710)	comGH	1964673..1965626 (-)	954	WP_000345126.1	class I SAM-dependent methyltransferase	Machinery gene
EQH24_RS10190 (EQH24_10715)	-	1965687..1966281 (-)	595	Protein_2013	class I SAM-dependent methyltransferase	-
EQH24_RS10195 (EQH24_10720)	comGG/cglG	1966418..1966831 (-)	414	WP_000265620.1	competence type IV pilus minor pilin ComGG	Machinery gene
EQH24_RS10200 (EQH24_10725)	comGF/cglF	1966809..1967270 (-)	462	WP_000250540.1	competence type IV pilus minor pilin ComGF	Machinery gene
EQH24_RS10205 (EQH24_10730)	comGE/cglE	1967233..1967535 (-)	303	WP_256901086.1	competence type IV pilus minor pilin ComGE	Machinery gene
EQH24_RS10210 (EQH24_10735)	comGD/cglD	1967498..1967902 (-)	405	WP_000588023.1	competence type IV pilus minor pilin ComGD	Machinery gene
EQH24_RS10215 (EQH24_10740)	comGC/cglC	1967895..1968161 (-)	267	WP_050129046.1	competence type IV pilus major pilin ComGC	Machinery gene
EQH24_RS10220 (EQH24_10745)	-	1968163..1968420 (-)	258	WP_238101663.1	hypothetical protein	-
EQH24_RS10225 (EQH24_10750)	-	1968652..1969608 (-)	957	WP_000350480.1	N-acetylmuramoyl-L-alanine amidase family protein	-
EQH24_RS10230 (EQH24_10755)	-	1969612..1969944 (-)	333	WP_001186219.1	phage holin	-
EQH24_RS10235 (EQH24_10760)	-	1969948..1970247 (-)	300	WP_001811580.1	hypothetical protein	-
EQH24_RS10240 (EQH24_10765)	-	1970256..1970606 (-)	351	WP_000852245.1	hypothetical protein	-
EQH24_RS10245 (EQH24_10770)	-	1970609..1970812 (-)	204	WP_001091123.1	hypothetical protein	-
EQH24_RS10250 (EQH24_10775)	-	1970793..1970909 (-)	117	WP_001063632.1	hypothetical protein	-

Sequence

Protein

• Length: 88 a.a.
• Molecular weight: 9892.34 Da
• Isoelectric Point: 5.8767

>NTDB_id=297010 EQH24_RS10215 WP_050129046.1 1967895..1968161(-) (comGC/cglC) [Streptococcus pneumoniae strain TVO_1901930]
MLVVLLIISVLFLLFVPNLTKQKEAVNDKGKAAVVKVVESQAELYSLEKNEDASLSKLKDDGRITEEQAKAYKEYHDKNG
EANRKVND

Nucleotide

• Length: 267 bp

>NTDB_id=297010 EQH24_RS10215 WP_050129046.1 1967895..1968161(-) (comGC/cglC) [Streptococcus pneumoniae strain TVO_1901930]
ATGTTGGTGGTCTTGCTGATTATCAGCGTGCTTTTCTTGCTCTTTGTACCTAATCTGACCAAGCAAAAAGAAGCAGTCAA
TGACAAAGGAAAAGCAGCTGTTGTTAAGGTGGTGGAAAGCCAGGCAGAACTTTATAGCTTGGAAAAGAATGAAGATGCTA
GCCTAAGCAAGTTAAAAGACGATGGGCGAATCACGGAAGAACAGGCTAAAGCTTATAAAGAATACCATGATAAAAATGGA
GAAGCAAATCGTAAAGTCAATGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC/cglC	Streptococcus pneumoniae Rx1	95.455	100	0.955
comGC/cglC	Streptococcus pneumoniae D39	95.455	100	0.955
comGC/cglC	Streptococcus pneumoniae R6	95.455	100	0.955
comGC/cglC	Streptococcus pneumoniae TIGR4	94.318	100	0.943
comGC/cglC	Streptococcus mitis SK321	90.541	84.091	0.761
comGC/cglC	Streptococcus mitis NCTC 12261	93.75	72.727	0.682
comGC	Streptococcus gordonii str. Challis substr. CH1	66.667	98.864	0.659
comGC	Streptococcus suis isolate S10	65.278	81.818	0.534
comGC	Streptococcus mutans UA140	60	79.545	0.477
comGC	Streptococcus mutans UA159	60	79.545	0.477
comGC	Lactococcus lactis subsp. cremoris KW2	50.667	85.227	0.432
comGC	Staphylococcus aureus MW2	43.529	96.591	0.42
comGC	Staphylococcus aureus N315	43.529	96.591	0.42