Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | CSC55_RS08640 | Genome accession | NZ_CP029653 |
| Coordinates | 1732242..1732553 (-) | Length | 103 a.a. |
| NCBI ID | WP_000472257.1 | Uniprot ID | A0A115HMG3 |
| Organism | Staphylococcus aureus strain AR_0470 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1727242..1737553
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSC55_RS08605 (CSC55_0996) | gcvPA | 1727744..1729090 (-) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CSC55_RS08610 (CSC55_0997) | gcvT | 1729110..1730201 (-) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CSC55_RS08615 (CSC55_0998) | - | 1730360..1730884 (-) | 525 | WP_001015125.1 | shikimate kinase | - |
| CSC55_RS08620 | - | 1730874..1731020 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CSC55_RS08625 (CSC55_0999) | comGF | 1731117..1731614 (-) | 498 | WP_001794328.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CSC55_RS08630 (CSC55_1000) | comGE | 1731532..1731831 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| CSC55_RS08635 (CSC55_1001) | comGD | 1731818..1732264 (-) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CSC55_RS08640 (CSC55_1002) | comGC | 1732242..1732553 (-) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CSC55_RS08645 (CSC55_1003) | comGB | 1732567..1733637 (-) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CSC55_RS08650 (CSC55_1004) | comGA | 1733609..1734583 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CSC55_RS08655 (CSC55_1005) | - | 1734635..1735258 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CSC55_RS08660 (CSC55_1006) | - | 1735255..1735584 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CSC55_RS08665 (CSC55_1007) | - | 1735584..1736570 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| CSC55_RS08670 (CSC55_1008) | - | 1736567..1736770 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11373.39 Da Isoelectric Point: 7.8600
>NTDB_id=294589 CSC55_RS08640 WP_000472257.1 1732242..1732553(-) (comGC) [Staphylococcus aureus strain AR_0470]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEEQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEEQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=294589 CSC55_RS08640 WP_000472257.1 1732242..1732553(-) (comGC) [Staphylococcus aureus strain AR_0470]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGAGCAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGAGCAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
99.029 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
99.029 |
100 |
0.99 |
| comGC/cglC | Streptococcus mitis SK321 |
48.039 |
99.029 |
0.476 |
| comGC/cglC | Streptococcus pneumoniae R6 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae D39 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
52.326 |
83.495 |
0.437 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comYC | Streptococcus mutans UA140 |
50 |
73.786 |
0.369 |
| comYC | Streptococcus mutans UA159 |
50 |
73.786 |
0.369 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |