Detailed information
Bioinformatically predicted
Overview
| Name | Cj0011c | Type | Machinery gene |
| Locus tag | CHAB381_RS00360 | Genome accession | NC_009714 |
| Coordinates | 65203..65454 (+) | Length | 83 a.a. |
| NCBI ID | WP_041570433.1 | Uniprot ID | - |
| Organism | Campylobacter hominis ATCC BAA-381 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 60203..70454
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHAB381_RS00330 (CHAB381_0064) | - | 60529..61584 (-) | 1056 | WP_011991527.1 | adenine-specific methyltransferase EcoRI family protein | - |
| CHAB381_RS00335 (CHAB381_0065) | - | 61595..62689 (-) | 1095 | WP_011991528.1 | adenine-specific methyltransferase EcoRI family protein | - |
| CHAB381_RS00345 (CHAB381_0066) | - | 63206..63841 (+) | 636 | WP_011991529.1 | hypothetical protein | - |
| CHAB381_RS09175 | - | 63844..63966 (+) | 123 | WP_172462805.1 | LPD23 domain-containing protein | - |
| CHAB381_RS00350 (CHAB381_0067) | - | 63950..64621 (+) | 672 | WP_011991530.1 | hypothetical protein | - |
| CHAB381_RS00355 | - | 64618..64878 (+) | 261 | WP_041570432.1 | hypothetical protein | - |
| CHAB381_RS00360 (CHAB381_0069) | Cj0011c | 65203..65454 (+) | 252 | WP_041570433.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| CHAB381_RS00365 | - | 65672..65893 (-) | 222 | WP_370445521.1 | hypothetical protein | - |
| CHAB381_RS00370 (CHAB381_0072) | uvrA | 66054..68864 (-) | 2811 | WP_041570552.1 | excinuclease ABC subunit UvrA | - |
| CHAB381_RS00375 (CHAB381_0073) | - | 69049..69549 (+) | 501 | WP_011991535.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 83 a.a. Molecular weight: 9500.16 Da Isoelectric Point: 9.5698
>NTDB_id=28792 CHAB381_RS00360 WP_041570433.1 65203..65454(+) (Cj0011c) [Campylobacter hominis ATCC BAA-381]
MKRLLLLFVFSFSLLFGAININTASKEELMTLKGIGETTAEAIIEYRKENKFTKIEDIKNVKGIGDKKFESIKEDIEIKD
SKK
MKRLLLLFVFSFSLLFGAININTASKEELMTLKGIGETTAEAIIEYRKENKFTKIEDIKNVKGIGDKKFESIKEDIEIKD
SKK
Nucleotide
Download Length: 252 bp
>NTDB_id=28792 CHAB381_RS00360 WP_041570433.1 65203..65454(+) (Cj0011c) [Campylobacter hominis ATCC BAA-381]
ATGAAAAGATTATTGTTATTATTTGTTTTTAGTTTTAGTTTGTTGTTTGGTGCTATAAATATAAACACTGCTTCCAAGGA
AGAACTTATGACTCTTAAAGGTATTGGAGAGACTACAGCAGAAGCCATAATAGAATACAGAAAAGAAAATAAATTTACAA
AAATAGAAGATATTAAAAATGTAAAAGGCATAGGTGATAAGAAATTTGAATCAATAAAAGAAGATATTGAGATTAAAGAT
AGCAAGAAATAA
ATGAAAAGATTATTGTTATTATTTGTTTTTAGTTTTAGTTTGTTGTTTGGTGCTATAAATATAAACACTGCTTCCAAGGA
AGAACTTATGACTCTTAAAGGTATTGGAGAGACTACAGCAGAAGCCATAATAGAATACAGAAAAGAAAATAAATTTACAA
AAATAGAAGATATTAAAAATGTAAAAGGCATAGGTGATAAGAAATTTGAATCAATAAAAGAAGATATTGAGATTAAAGAT
AGCAAGAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
62.821 |
93.976 |
0.59 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
56.452 |
74.699 |
0.422 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
42.683 |
98.795 |
0.422 |
| comE | Neisseria gonorrhoeae MS11 |
41.975 |
97.59 |
0.41 |
| comE | Neisseria gonorrhoeae MS11 |
41.975 |
97.59 |
0.41 |
| comE | Neisseria gonorrhoeae MS11 |
41.975 |
97.59 |
0.41 |
| comE | Neisseria gonorrhoeae MS11 |
41.975 |
97.59 |
0.41 |
| comEA | Legionella pneumophila strain ERS1305867 |
46.269 |
80.723 |
0.373 |
| comEA | Legionella pneumophila str. Paris |
46.269 |
80.723 |
0.373 |
| comEA | Vibrio cholerae strain A1552 |
62 |
60.241 |
0.373 |
| comEA | Vibrio cholerae C6706 |
62 |
60.241 |
0.373 |
| comEA | Acinetobacter baumannii D1279779 |
49.206 |
75.904 |
0.373 |
| comEA | Acinetobacter baumannii strain A118 |
47.619 |
75.904 |
0.361 |