Detailed information NTG0284815

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SPWS13_RS17460
• Genome accession: NZ_CP028435
• Coordinates: 3876910..3877983 (+)
• Length: 357 a.a.
• NCBI ID: WP_011788615.1
• Uniprot ID: A1RHG3
• Organism: Shewanella putrefaciens strain WS13
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3871910..3882983

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPWS13_RS17445 (SPWS13_4122)	-	3871914..3872798 (+)	885	WP_061782788.1	peptidoglycan DD-metalloendopeptidase family protein	-
SPWS13_RS17450 (SPWS13_4123)	rpoS	3872880..3873860 (+)	981	WP_011788613.1	RNA polymerase sigma factor RpoS	-
SPWS13_RS17455 (SPWS13_4125)	mutS	3873957..3876527 (-)	2571	WP_061782789.1	DNA mismatch repair protein MutS	-
SPWS13_RS17460 (SPWS13_4126)	recA	3876910..3877983 (+)	1074	WP_011788615.1	recombinase RecA	Machinery gene
SPWS13_RS17465	-	3878058..3878470 (+)	413	Protein_3389	regulatory protein RecX	-
SPWS13_RS17470 (SPWS13_4129)	alaS	3878811..3881435 (+)	2625	WP_128090272.1	alanine--tRNA ligase	-
SPWS13_RS17475 (SPWS13_4130)	-	3881445..3882701 (+)	1257	WP_011788618.1	aspartate kinase	-

Sequence

Protein

• Length: 357 a.a.
• Molecular weight: 38047.45 Da
• Isoelectric Point: 4.8722

>NTDB_id=284815 SPWS13_RS17460 WP_011788615.1 3876910..3877983(+) (recA) [Shewanella putrefaciens strain WS13]
MKVDPNKEKALAAVLSQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEV
IAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVG
NETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQGRANAGKYLTENPAIAAEI
DKTLRELLLSNPSALASSASDDESTEGNIDLETGEIF

Nucleotide

• Length: 1074 bp

>NTDB_id=284815 SPWS13_RS17460 WP_011788615.1 3876910..3877983(+) (recA) [Shewanella putrefaciens strain WS13]
ATGAAGGTCGATCCAAACAAAGAGAAAGCACTCGCAGCGGTATTGAGCCAGATTGAAAAGCAATTTGGTAAAGGTTCTAT
CATGAAGCTGGGCGAAGATCGCTCTATGGATGTCGAAACCATTTCTACTGGTTCGTTATCTCTAGATGTCGCTTTAGGTG
CTGGTGGCTTGCCAATGGGGCGTATTGTTGAGATCTATGGTCCTGAATCATCTGGTAAAACGACACTGACTTTAGAAGTG
ATTGCCGCTGCGCAGCGTGAAGGTAAAACCTGTGCTTTTATCGATGCAGAACATGCGTTAGACCCAATCTATGCTAAAAA
ATTGGGCGTAGATATTGATAATTTGCTTTGTTCACAACCGGATACTGGCGAGCAAGCGCTTGAGATTTGCGATGCATTAA
CTCGCTCGGGGGCCGTTGATGTTATCGTGGTCGACTCAGTCGCAGCATTAACGCCTAAAGCTGAAATCGAAGGCGAAATT
GGTGATTCTCACATGGGCCTAGCGGCGCGTATGATGAGCCAAGCCATGCGTAAACTTGCTGGTAACTTGAAACAATCCAA
CACCTTACTTATCTTCATCAACCAAATTCGGATGAAGATTGGTGTGATGTTCGGTAACCCAGAAACGACAACCGGTGGTA
ACGCGCTGAAGTTCTATGCTTCTGTTCGTTTGGATATTCGCCGCACAGGTGCCATTAAAGACGGCGATGAAGTTGTCGGT
AACGAAACTCGCGTTAAAGTGGTGAAAAACAAAGTTGCGGCTCCATTTAAGCAAGCTGAGTTCCAAATCCTTTACGGCCA
AGGTATTAACCGTACAGGTGAGTTAGTCGACTTAGGTGTAGCCCATAAGTTGATTGAAAAAGCGGGCGCTTGGTACAGCT
ATAAAGGTGATAAAATTGGCCAAGGTCGTGCAAATGCGGGTAAATATCTGACTGAAAACCCAGCAATTGCCGCCGAAATA
GACAAGACATTACGTGAGTTACTGTTAAGTAATCCAAGTGCCCTAGCATCATCTGCATCCGATGATGAAAGCACAGAAGG
TAATATTGACTTAGAGACAGGCGAAATATTCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: A1RHG3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	82.899	96.639	0.801
recA	Vibrio cholerae O1 biovar El Tor strain E7946	82.899	96.639	0.801
recA	Pseudomonas stutzeri DSM 10701	72.434	95.518	0.692
recA	Acinetobacter baylyi ADP1	70.349	96.359	0.678
recA	Acinetobacter baumannii D1279779	70.381	95.518	0.672
recA	Glaesserella parasuis strain SC1401	68.286	98.039	0.669
recA	Ralstonia pseudosolanacearum GMI1000	69.325	91.317	0.633
recA	Neisseria gonorrhoeae MS11	69.659	90.476	0.63
recA	Neisseria gonorrhoeae MS11	69.659	90.476	0.63
recA	Neisseria gonorrhoeae strain FA1090	69.659	90.476	0.63
recA	Streptococcus mitis NCTC 12261	60.983	96.919	0.591
recA	Streptococcus pneumoniae TIGR4	63.72	91.877	0.585
recA	Streptococcus pneumoniae Rx1	63.72	91.877	0.585
recA	Streptococcus pneumoniae D39	63.72	91.877	0.585
recA	Streptococcus pneumoniae R6	63.72	91.877	0.585
recA	Streptococcus mitis SK321	63.11	91.877	0.58
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60	96.639	0.58
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.562	93.277	0.574
recA	Streptococcus pyogenes NZ131	61.89	91.877	0.569
recA	Streptococcus mutans UA159	61.585	91.877	0.566
recA	Bacillus subtilis subsp. subtilis str. 168	62.617	89.916	0.563
recA	Helicobacter pylori strain NCTC11637	60.542	92.997	0.563
recA	Helicobacter pylori 26695	60.241	92.997	0.56
recA	Lactococcus lactis subsp. cremoris KW2	60.061	91.877	0.552
recA	Latilactobacillus sakei subsp. sakei 23K	61.755	89.356	0.552
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.587	88.235	0.543