Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | C7M16_RS11120 | Genome accession | NZ_CP028201 |
| Coordinates | 2231930..2232265 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM102753 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2226930..2237265
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M16_RS11100 (C7M16_02191) | gcvT | 2227522..2228610 (-) | 1089 | WP_029317919.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| C7M16_RS11105 (C7M16_02192) | hepAA | 2229052..2230725 (+) | 1674 | WP_041850014.1 | SNF2-related protein | - |
| C7M16_RS11110 (C7M16_02193) | yqhG | 2230746..2231540 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| C7M16_RS11115 (C7M16_02194) | sinI | 2231723..2231896 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| C7M16_RS11120 (C7M16_02195) | sinR | 2231930..2232265 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| C7M16_RS11125 (C7M16_02196) | tasA | 2232358..2233143 (-) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| C7M16_RS11130 (C7M16_02197) | sipW | 2233207..2233779 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| C7M16_RS11135 (C7M16_02198) | tapA | 2233763..2234524 (-) | 762 | WP_160221678.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C7M16_RS11140 (C7M16_02199) | yqzG | 2234796..2235122 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| C7M16_RS11145 (C7M16_02200) | spoIITA | 2235164..2235343 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| C7M16_RS11150 (C7M16_02201) | comGG | 2235415..2235789 (-) | 375 | WP_033884701.1 | ComG operon protein ComGG | Machinery gene |
| C7M16_RS11155 | comGF | 2235790..2236173 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| C7M16_RS11160 (C7M16_02203) | comGE | 2236199..2236546 (-) | 348 | WP_033884703.1 | ComG operon protein 5 | Machinery gene |
| C7M16_RS11165 (C7M16_02204) | comGD | 2236530..2236961 (-) | 432 | WP_015714255.1 | comG operon protein ComGD | Machinery gene |
| C7M16_RS11170 (C7M16_02205) | comGC | 2236951..2237247 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=282334 C7M16_RS11120 WP_003226345.1 2231930..2232265(+) (sinR) [Bacillus subtilis strain SRCM102753]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=282334 C7M16_RS11120 WP_003226345.1 2231930..2232265(+) (sinR) [Bacillus subtilis strain SRCM102753]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCGGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCGGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |