Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | SPV_RS09105 | Genome accession | NZ_CP027540 |
| Coordinates | 1712469..1712864 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain D39V | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1707469..1717864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPV_RS09080 (SPV_1706) | - | 1707810..1708343 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| SPV_RS11275 (SPV_1707) | - | 1708697..1708903 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| SPV_RS09090 (SPV_1708) | - | 1709063..1710292 (+) | 1230 | WP_000436473.1 | ISL3 family transposase | - |
| SPV_RS09095 (SPV_1709) | groL | 1710391..1712013 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| SPV_RS09100 (SPV_1710) | groES | 1712029..1712313 (-) | 285 | WP_000917304.1 | co-chaperone GroES | - |
| SPV_RS09105 (SPV_1711) | ssbB/cilA | 1712469..1712864 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| SPV_RS09110 (SPV_1712) | - | 1712942..1713703 (-) | 762 | WP_001107755.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| SPV_RS09115 (SPV_1713) | ytpR | 1713736..1714362 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| SPV_RS09120 (SPV_1714) | - | 1714378..1714695 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| SPV_RS09125 (SPV_1715) | - | 1714692..1714991 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| SPV_RS11975 (SPV_2407) | - | 1715085..1715216 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| SPV_RS11795 | - | 1715241..1715303 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| SPV_RS09130 (SPV_1716) | - | 1715328..1715519 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| SPV_RS09135 (SPV_1717) | - | 1715680..1716354 (-) | 675 | WP_000725742.1 | membrane protein | - |
| SPV_RS09140 (SPV_1718) | - | 1716360..1716806 (-) | 447 | WP_000776587.1 | LytTR family DNA-binding domain-containing protein | - |
| SPV_RS09145 (SPV_1719) | - | 1716920..1717423 (-) | 504 | WP_000800927.1 | phosphatase PAP2 family protein | - |
| SPV_RS09150 (SPV_1720) | - | 1717420..1717782 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=277944 SPV_RS09105 WP_000282467.1 1712469..1712864(-) (ssbB/cilA) [Streptococcus pneumoniae strain D39V]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=277944 SPV_RS09105 WP_000282467.1 1712469..1712864(-) (ssbB/cilA) [Streptococcus pneumoniae strain D39V]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |