Detailed information NTG0266886

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: C2E46_RS01230
• Genome accession: NZ_CP026082
• Coordinates: 210606..211001 (+)
• Length: 131 a.a.
• NCBI ID: WP_000282449.1
• Uniprot ID: A0A0H1UUC1
• Organism: Streptococcus agalactiae strain YZ1605
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 205606..216001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2E46_RS01195 (C2E46_01205)	proC	206005..206775 (-)	771	WP_001872483.1	pyrroline-5-carboxylate reductase	-
C2E46_RS01200 (C2E46_01210)	pepA	206845..207912 (-)	1068	WP_001281321.1	glutamyl aminopeptidase	-
C2E46_RS01205 (C2E46_01215)	-	208092..208331 (-)	240	WP_000660180.1	hypothetical protein	-
C2E46_RS01210 (C2E46_01220)	-	208492..208776 (+)	285	WP_000791272.1	DUF4651 domain-containing protein	-
C2E46_RS01215 (C2E46_01225)	-	208773..209096 (+)	324	WP_000602783.1	thioredoxin family protein	-
C2E46_RS01220 (C2E46_01230)	ytpR	209129..209755 (+)	627	WP_000578330.1	YtpR family tRNA-binding protein	-
C2E46_RS01225 (C2E46_01235)	-	209809..210525 (-)	717	WP_000186179.1	class I SAM-dependent methyltransferase	-
C2E46_RS01230 (C2E46_01240)	ssbA	210606..211001 (+)	396	WP_000282449.1	single-stranded DNA-binding protein	Machinery gene
C2E46_RS01235 (C2E46_01245)	-	211125..211769 (+)	645	WP_000416617.1	HAD family phosphatase	-
C2E46_RS01240 (C2E46_01250)	-	211796..213541 (+)	1746	WP_000930335.1	LytS/YhcK type 5TM receptor domain-containing protein	-
C2E46_RS01245 (C2E46_01255)	-	213522..214262 (+)	741	WP_000697628.1	LytTR family DNA-binding domain-containing protein	-
C2E46_RS01250 (C2E46_01260)	-	214432..214887 (+)	456	WP_000683315.1	CidA/LrgA family protein	-
C2E46_RS01255 (C2E46_01265)	lrgB	214889..215617 (+)	729	WP_000394889.1	antiholin-like protein LrgB	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14760.77 Da
• Isoelectric Point: 7.0189

>NTDB_id=266886 C2E46_RS01230 WP_000282449.1 210606..211001(+) (ssbA) [Streptococcus agalactiae strain YZ1605]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISVDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=266886 C2E46_RS01230 WP_000282449.1 210606..211001(+) (ssbA) [Streptococcus agalactiae strain YZ1605]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTAAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAGTAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A0H1UUC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.809
ssbB/cilA	Streptococcus pneumoniae R6	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae Rx1	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae D39	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	77.863	100	0.779
ssbB	Streptococcus sobrinus strain NIDR 6715-7	77.099	100	0.771
ssbB/cilA	Streptococcus mitis NCTC 12261	77.099	100	0.771
ssbB/cilA	Streptococcus mitis SK321	77.099	100	0.771
ssbB	Lactococcus lactis subsp. cremoris KW2	61.404	87.023	0.534
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	46.903	86.26	0.405