Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C2H96_RS05055 Genome accession   NZ_CP026035
Coordinates   1024832..1025023 (-) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis strain PK5_68     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1019832..1030023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H96_RS05030 (C2H96_04945) appD 1020161..1021147 (-) 987 WP_015383344.1 oligopeptide ABC transporter ATP-binding protein AppD -
  C2H96_RS05035 (C2H96_04950) yjaZ 1021338..1022123 (-) 786 WP_213419345.1 DUF2268 domain-containing protein -
  C2H96_RS05040 (C2H96_04955) fabF 1022199..1023440 (-) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C2H96_RS05045 (C2H96_04960) fabH 1023463..1024401 (-) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C2H96_RS05050 (C2H96_04965) yjzB 1024566..1024802 (+) 237 WP_072173825.1 spore coat protein YjzB -
  C2H96_RS05055 (C2H96_04970) comZ 1024832..1025023 (-) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  C2H96_RS05060 (C2H96_04975) med 1025038..1025991 (-) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C2H96_RS05065 (C2H96_04980) - 1026082..1026639 (-) 558 WP_021479559.1 hypothetical protein -
  C2H96_RS05070 (C2H96_04985) - 1026721..1027455 (-) 735 WP_003245223.1 hypothetical protein -
  C2H96_RS05075 (C2H96_04990) yjzD 1027704..1027889 (+) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C2H96_RS05080 (C2H96_04995) yjzC 1027936..1028115 (-) 180 WP_003245356.1 YjzC family protein -
  C2H96_RS05085 (C2H96_05000) argF 1028201..1029160 (-) 960 WP_014476421.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=265518 C2H96_RS05055 WP_003224559.1 1024832..1025023(-) (comZ) [Bacillus subtilis strain PK5_68]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=265518 C2H96_RS05055 WP_003224559.1 1024832..1025023(-) (comZ) [Bacillus subtilis strain PK5_68]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment