Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | C0J00_RS00900 | Genome accession | NZ_CP025536 |
| Coordinates | 159094..159486 (+) | Length | 130 a.a. |
| NCBI ID | WP_104967125.1 | Uniprot ID | A0A2L0D1U4 |
| Organism | Streptococcus pluranimalium strain TH11417 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 154094..164486
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0J00_RS00875 (C0J00_00875) | - | 154688..155632 (+) | 945 | WP_104967120.1 | sugar phosphate isomerase/epimerase family protein | - |
| C0J00_RS00880 (C0J00_00880) | - | 155635..157005 (+) | 1371 | WP_104967121.1 | PTS transporter subunit EIIC | - |
| C0J00_RS00885 (C0J00_00885) | - | 157078..157818 (+) | 741 | WP_104967122.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| C0J00_RS00890 (C0J00_00890) | rpe | 157884..158534 (+) | 651 | WP_104967123.1 | ribulose-phosphate 3-epimerase | - |
| C0J00_RS00895 (C0J00_00895) | rpiB | 158531..158989 (+) | 459 | WP_104967124.1 | ribose 5-phosphate isomerase B | - |
| C0J00_RS00900 (C0J00_00900) | ssbA | 159094..159486 (+) | 393 | WP_104967125.1 | single-stranded DNA-binding protein | Machinery gene |
| C0J00_RS00905 (C0J00_00905) | - | 159787..163716 (+) | 3930 | WP_233995855.1 | GH32 C-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 130 a.a. Molecular weight: 14684.71 Da Isoelectric Point: 7.0179
>NTDB_id=262330 C0J00_RS00900 WP_104967125.1 159094..159486(+) (ssbA) [Streptococcus pluranimalium strain TH11417]
MYNKTILIGRLVATPEMVKTPNDKSVARVTVAVNRRFKSKDGEREADFVNVVFWGRLAETLASYGTKGSLISLDGELRTR
SYEKDGQKHYMTEVLGQSFQLLESRAQRAMRENNVAADLADLVLEEDLPF
MYNKTILIGRLVATPEMVKTPNDKSVARVTVAVNRRFKSKDGEREADFVNVVFWGRLAETLASYGTKGSLISLDGELRTR
SYEKDGQKHYMTEVLGQSFQLLESRAQRAMRENNVAADLADLVLEEDLPF
Nucleotide
Download Length: 393 bp
>NTDB_id=262330 C0J00_RS00900 WP_104967125.1 159094..159486(+) (ssbA) [Streptococcus pluranimalium strain TH11417]
ATGTATAATAAAACGATTTTAATTGGCCGCTTGGTGGCTACGCCTGAGATGGTGAAGACGCCTAATGATAAGTCTGTGGC
ACGTGTGACGGTTGCTGTCAATCGCCGCTTTAAGTCTAAGGATGGCGAGCGTGAAGCAGATTTTGTCAATGTAGTCTTTT
GGGGACGTTTGGCAGAAACGCTAGCCTCTTACGGAACCAAGGGTAGTTTGATTTCATTGGATGGAGAGTTGCGAACGCGC
TCATATGAAAAAGACGGGCAAAAACACTATATGACAGAAGTCTTAGGACAATCCTTCCAATTGCTAGAAAGTCGTGCCCA
ACGTGCCATGCGTGAGAATAACGTAGCAGCAGACTTAGCGGATCTAGTGCTGGAAGAAGATCTGCCTTTCTAA
ATGTATAATAAAACGATTTTAATTGGCCGCTTGGTGGCTACGCCTGAGATGGTGAAGACGCCTAATGATAAGTCTGTGGC
ACGTGTGACGGTTGCTGTCAATCGCCGCTTTAAGTCTAAGGATGGCGAGCGTGAAGCAGATTTTGTCAATGTAGTCTTTT
GGGGACGTTTGGCAGAAACGCTAGCCTCTTACGGAACCAAGGGTAGTTTGATTTCATTGGATGGAGAGTTGCGAACGCGC
TCATATGAAAAAGACGGGCAAAAACACTATATGACAGAAGTCTTAGGACAATCCTTCCAATTGCTAGAAAGTCGTGCCCA
ACGTGCCATGCGTGAGAATAACGTAGCAGCAGACTTAGCGGATCTAGTGCTGGAAGAAGATCTGCCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
83.969 |
100 |
0.846 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
77.099 |
100 |
0.777 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.099 |
100 |
0.777 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
76.336 |
100 |
0.769 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
76.336 |
100 |
0.769 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
76.336 |
100 |
0.769 |
| ssbB/cilA | Streptococcus mitis SK321 |
76.336 |
100 |
0.769 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
74.809 |
100 |
0.754 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
63.158 |
87.692 |
0.554 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50 |
81.538 |
0.408 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
42.373 |
90.769 |
0.385 |