Detailed information NTG0261157

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: SPSF3K_RS02020
• Genome accession: NZ_CP025420
• Coordinates: 417768..418166 (+)
• Length: 132 a.a.
• NCBI ID: WP_003105619.1
• Uniprot ID: A0A0E2UAZ2
• Organism: Streptococcus parauberis strain SPOF3K
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 412768..423166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPSF3K_RS01980 (SPSF3K_00409)	-	412842..413054 (+)	213	WP_003108636.1	helix-turn-helix transcriptional regulator	-
SPSF3K_RS01985 (SPSF3K_00410)	-	413047..413499 (+)	453	WP_003108634.1	hypothetical protein	-
SPSF3K_RS01990 (SPSF3K_00411)	-	413508..414161 (+)	654	WP_003108632.1	CPBP family intramembrane glutamic endopeptidase	-
SPSF3K_RS01995 (SPSF3K_00412)	proC	414178..414948 (-)	771	WP_003104671.1	pyrroline-5-carboxylate reductase	-
SPSF3K_RS02000 (SPSF3K_00413)	pepA	414960..416027 (-)	1068	WP_003108630.1	glutamyl aminopeptidase	-
SPSF3K_RS02005 (SPSF3K_00414)	-	416390..416671 (+)	282	WP_003102775.1	DUF4651 domain-containing protein	-
SPSF3K_RS02010 (SPSF3K_00415)	-	416671..416988 (+)	318	WP_003103432.1	thioredoxin family protein	-
SPSF3K_RS02015 (SPSF3K_00416)	ytpR	417004..417630 (+)	627	WP_003108627.1	YtpR family tRNA-binding protein	-
SPSF3K_RS02020 (SPSF3K_00417)	ssbA	417768..418166 (+)	399	WP_003105619.1	single-stranded DNA-binding protein	Machinery gene
SPSF3K_RS02025 (SPSF3K_00418)	-	418635..419606 (+)	972	WP_003108625.1	ABC transporter substrate-binding protein	-
SPSF3K_RS02030 (SPSF3K_00419)	-	419618..420604 (+)	987	WP_003108623.1	ABC transporter substrate-binding protein	-
SPSF3K_RS02035 (SPSF3K_00420)	-	420639..421523 (+)	885	WP_003104091.1	ABC transporter permease	-
SPSF3K_RS02040 (SPSF3K_00421)	-	421532..422335 (+)	804	WP_003108621.1	ABC transporter ATP-binding protein	-
SPSF3K_RS02045 (SPSF3K_00422)	-	422418..423059 (-)	642	WP_003102694.1	deoxynucleoside kinase	-

Sequence

Protein

• Length: 132 a.a.
• Molecular weight: 15171.37 Da
• Isoelectric Point: 7.7086

>NTDB_id=261157 SPSF3K_RS02020 WP_003105619.1 417768..418166(+) (ssbA) [Streptococcus parauberis strain SPOF3K]
MYNRVIMIGRLVADPQLIKTPKDKSVCRVSVAVNRRYKNAQGERQVDFVNLVLWGKLAESLVSYGSKGSLISLEGELRTR
RYEKDGKNCYVTEVLCHTFQLLESRAQRAMRENNMTNDLSDLVLDEEDDLPF

Nucleotide

• Length: 399 bp

>NTDB_id=261157 SPSF3K_RS02020 WP_003105619.1 417768..418166(+) (ssbA) [Streptococcus parauberis strain SPOF3K]
ATGTACAATAGAGTAATCATGATAGGACGCTTAGTTGCCGACCCACAATTAATTAAGACACCGAAAGATAAGTCGGTTTG
TCGTGTTTCAGTTGCTGTTAATCGTCGTTATAAAAATGCTCAAGGTGAAAGGCAAGTGGACTTTGTCAATTTAGTTTTAT
GGGGGAAACTTGCTGAATCACTAGTTTCCTATGGTAGTAAAGGCAGCCTAATTTCTTTGGAAGGCGAGTTGCGAACACGT
CGCTATGAAAAAGATGGGAAGAACTGTTATGTGACCGAGGTTTTGTGTCATACTTTTCAATTATTAGAAAGTCGTGCGCA
GCGAGCAATGCGTGAAAATAACATGACGAATGATCTCTCTGACTTAGTTCTTGATGAGGAAGATGACCTACCCTTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A0E2UAZ2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	74.242	100	0.742
ssbB/cilA	Streptococcus mitis NCTC 12261	71.212	100	0.712
ssbB/cilA	Streptococcus pneumoniae D39	69.697	100	0.697
ssbB/cilA	Streptococcus pneumoniae R6	69.697	100	0.697
ssbB/cilA	Streptococcus pneumoniae Rx1	69.697	100	0.697
ssbB/cilA	Streptococcus pneumoniae TIGR4	68.939	100	0.689
ssbB	Streptococcus sobrinus strain NIDR 6715-7	68.182	100	0.682
ssbB/cilA	Streptococcus mitis SK321	68.182	100	0.682
ssbB	Lactococcus lactis subsp. cremoris KW2	54.464	84.848	0.462
ssb	Latilactobacillus sakei subsp. sakei 23K	45.133	85.606	0.386
ssbB	Bacillus subtilis subsp. subtilis str. 168	45.283	80.303	0.364