Detailed information
Bioinformatically predicted
Overview
| Name | comYA | Type | Machinery gene |
| Locus tag | CR921_RS08985 | Genome accession | NZ_CP025399 |
| Coordinates | 1717721..1718662 (-) | Length | 313 a.a. |
| NCBI ID | WP_014622005.1 | Uniprot ID | A0A2X3UX10 |
| Organism | Streptococcus thermophilus strain GABA | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1712721..1723662
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR921_RS08945 | - | 1712797..1713990 (-) | 1194 | WP_014608740.1 | acetate kinase | - |
| CR921_RS08950 | comYH | 1714046..1715002 (-) | 957 | WP_011681684.1 | class I SAM-dependent methyltransferase | Machinery gene |
| CR921_RS08955 | comGG | 1715047..1715364 (-) | 318 | WP_011681685.1 | competence type IV pilus minor pilin ComGG | - |
| CR921_RS08960 | comYF | 1715342..1715779 (-) | 438 | WP_011681686.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CR921_RS08965 | comGE | 1715763..1716056 (-) | 294 | WP_011226625.1 | competence type IV pilus minor pilin ComGE | - |
| CR921_RS08970 | comYD | 1716028..1716456 (-) | 429 | WP_011226626.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CR921_RS08975 | comYC | 1716416..1716742 (-) | 327 | WP_002946126.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CR921_RS08980 | comYB | 1716739..1717839 (-) | 1101 | WP_120764773.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CR921_RS08985 | comYA | 1717721..1718662 (-) | 942 | WP_014622005.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CR921_RS08990 | - | 1718743..1719105 (-) | 363 | WP_023909982.1 | DUF1033 family protein | - |
| CR921_RS08995 | rpoC | 1719264..1722902 (-) | 3639 | WP_011681690.1 | DNA-directed RNA polymerase subunit beta' | - |
Sequence
Protein
Download Length: 313 a.a. Molecular weight: 35421.62 Da Isoelectric Point: 6.3927
>NTDB_id=260959 CR921_RS08985 WP_014622005.1 1717721..1718662(-) (comYA) [Streptococcus thermophilus strain GABA]
MVTEFAKEMIKNADSCGAQDIYVIPRQDNYELYMRVGQERRLIDVYRPDFMASLIGHFKFVAGMMVGEKRRSQLGACDYD
CGDGHLVSLRLSTVGDYRGLESLVIRILHSERRELVYWNQGIQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQERFKGQ
QVISIEDPVEIKQDNVLQLQVNQVIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTIHAKSIAGV
YERLLDLGVDKSELDNALQGIAYMRLIKGGGVIDFARENFQNHSSTNWNQQLEGLVKQGCLTERDIQGEKIKD
MVTEFAKEMIKNADSCGAQDIYVIPRQDNYELYMRVGQERRLIDVYRPDFMASLIGHFKFVAGMMVGEKRRSQLGACDYD
CGDGHLVSLRLSTVGDYRGLESLVIRILHSERRELVYWNQGIQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQERFKGQ
QVISIEDPVEIKQDNVLQLQVNQVIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVLSTIHAKSIAGV
YERLLDLGVDKSELDNALQGIAYMRLIKGGGVIDFARENFQNHSSTNWNQQLEGLVKQGCLTERDIQGEKIKD
Nucleotide
Download Length: 942 bp
>NTDB_id=260959 CR921_RS08985 WP_014622005.1 1717721..1718662(-) (comYA) [Streptococcus thermophilus strain GABA]
ATGGTAACAGAATTTGCTAAGGAAATGATCAAAAATGCTGATAGTTGTGGGGCTCAAGACATCTATGTCATTCCACGTCA
GGATAATTATGAGCTCTATATGCGAGTCGGGCAAGAGAGGAGATTGATTGATGTATATCGGCCTGATTTCATGGCTAGTC
TTATTGGTCACTTTAAATTTGTGGCGGGAATGATGGTGGGTGAGAAGCGTAGGAGTCAACTGGGTGCATGTGACTATGAT
TGTGGTGACGGTCACTTGGTTTCTCTGCGTTTATCAACTGTTGGAGACTATCGAGGTTTGGAGAGCTTGGTTATCCGTAT
CCTACATTCCGAACGTCGAGAATTAGTGTATTGGAATCAAGGAATCCAGCCTATTAAGGATGCCTTGGATTATAGAGGAC
TGTATCTCTTTGCGGGTCCCGTAGGTTCTGGGAAGACCACACTTATGCATGAGTTGGTTCAGGAGCGTTTTAAGGGGCAG
CAGGTAATTTCGATTGAGGATCCTGTTGAAATCAAACAGGATAATGTCTTGCAACTCCAGGTTAATCAGGTGATTGATAT
GACCTATGATAGTTTGATTAAGCTATCTCTACGTCACCGTCCAGATGTTTTGATTATTGGGGAGATTCGGGATAAGGAGA
CTGCCCGGGCAGTTATTAGAGCTAGTCTAACAGGTGTAACTGTTCTTTCAACTATTCATGCTAAGAGTATTGCTGGCGTT
TACGAACGTCTCTTGGACCTTGGCGTAGATAAGTCTGAGTTGGATAATGCTCTACAAGGCATTGCCTACATGCGTTTGAT
CAAGGGGGGAGGTGTGATTGATTTTGCCAGAGAAAATTTCCAAAACCATTCGTCGACCAACTGGAATCAGCAGTTGGAAG
GTTTGGTTAAACAAGGATGTCTCACTGAGAGGGATATCCAAGGGGAAAAAATTAAAGATTAG
ATGGTAACAGAATTTGCTAAGGAAATGATCAAAAATGCTGATAGTTGTGGGGCTCAAGACATCTATGTCATTCCACGTCA
GGATAATTATGAGCTCTATATGCGAGTCGGGCAAGAGAGGAGATTGATTGATGTATATCGGCCTGATTTCATGGCTAGTC
TTATTGGTCACTTTAAATTTGTGGCGGGAATGATGGTGGGTGAGAAGCGTAGGAGTCAACTGGGTGCATGTGACTATGAT
TGTGGTGACGGTCACTTGGTTTCTCTGCGTTTATCAACTGTTGGAGACTATCGAGGTTTGGAGAGCTTGGTTATCCGTAT
CCTACATTCCGAACGTCGAGAATTAGTGTATTGGAATCAAGGAATCCAGCCTATTAAGGATGCCTTGGATTATAGAGGAC
TGTATCTCTTTGCGGGTCCCGTAGGTTCTGGGAAGACCACACTTATGCATGAGTTGGTTCAGGAGCGTTTTAAGGGGCAG
CAGGTAATTTCGATTGAGGATCCTGTTGAAATCAAACAGGATAATGTCTTGCAACTCCAGGTTAATCAGGTGATTGATAT
GACCTATGATAGTTTGATTAAGCTATCTCTACGTCACCGTCCAGATGTTTTGATTATTGGGGAGATTCGGGATAAGGAGA
CTGCCCGGGCAGTTATTAGAGCTAGTCTAACAGGTGTAACTGTTCTTTCAACTATTCATGCTAAGAGTATTGCTGGCGTT
TACGAACGTCTCTTGGACCTTGGCGTAGATAAGTCTGAGTTGGATAATGCTCTACAAGGCATTGCCTACATGCGTTTGAT
CAAGGGGGGAGGTGTGATTGATTTTGCCAGAGAAAATTTCCAAAACCATTCGTCGACCAACTGGAATCAGCAGTTGGAAG
GTTTGGTTAAACAAGGATGTCTCACTGAGAGGGATATCCAAGGGGAAAAAATTAAAGATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYA | Streptococcus mutans UA159 |
64.537 |
100 |
0.645 |
| comYA | Streptococcus mutans UA140 |
64.537 |
100 |
0.645 |
| comGA/cglA/cilD | Streptococcus mitis NCTC 12261 |
64.952 |
99.361 |
0.645 |
| comGA/cglA/cilD | Streptococcus pneumoniae D39 |
63.666 |
99.361 |
0.633 |
| comGA/cglA/cilD | Streptococcus pneumoniae Rx1 |
63.666 |
99.361 |
0.633 |
| comGA/cglA/cilD | Streptococcus pneumoniae R6 |
63.666 |
99.361 |
0.633 |
| comGA/cglA/cilD | Streptococcus pneumoniae TIGR4 |
63.666 |
99.361 |
0.633 |
| comYA | Streptococcus gordonii str. Challis substr. CH1 |
62.939 |
100 |
0.629 |
| comGA/cglA | Streptococcus sobrinus strain NIDR 6715-7 |
61.859 |
99.681 |
0.617 |
| comGA | Lactococcus lactis subsp. cremoris KW2 |
51.768 |
99.361 |
0.514 |
| comGA | Latilactobacillus sakei subsp. sakei 23K |
38.816 |
97.125 |
0.377 |