Detailed information NTG0259480

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: CXP32_RS09680
• Genome accession: NZ_CP025256
• Coordinates: 1822229..1822624 (-)
• Length: 131 a.a.
• NCBI ID: WP_053039748.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain Xen35
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1817229..1827624

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXP32_RS09655 (CXP32_09655)	-	1817492..1818025 (+)	534	WP_000775321.1	DUF402 domain-containing protein	-
CXP32_RS09660 (CXP32_09660)	-	1818379..1818585 (-)	207	WP_000768520.1	transcriptional regulator	-
CXP32_RS09665 (CXP32_09665)	-	1818746..1820052 (+)	1307	Protein_1797	transposase	-
CXP32_RS09670 (CXP32_09670)	groL	1820151..1821773 (-)	1623	WP_000031573.1	chaperonin GroEL	-
CXP32_RS09675 (CXP32_09675)	groES	1821789..1822073 (-)	285	WP_000917330.1	co-chaperone GroES	-
CXP32_RS09680 (CXP32_09680)	ssbB/cilA	1822229..1822624 (-)	396	WP_053039748.1	single-stranded DNA-binding protein	Machinery gene
CXP32_RS09685 (CXP32_09685)	-	1822702..1823463 (-)	762	WP_050215706.1	SDR family NAD(P)-dependent oxidoreductase	-
CXP32_RS09690 (CXP32_09690)	ytpR	1823505..1824131 (-)	627	WP_000578309.1	YtpR family tRNA-binding protein	-
CXP32_RS09695 (CXP32_09695)	-	1824147..1824464 (-)	318	WP_000615767.1	thioredoxin family protein	-
CXP32_RS09700 (CXP32_09700)	-	1824461..1824760 (-)	300	WP_001013974.1	DUF4651 domain-containing protein	-
CXP32_RS12620	-	1824854..1824985 (+)	132	WP_001811306.1	hypothetical protein	-
CXP32_RS12445	-	1825010..1825090 (-)	81	WP_223200442.1	hypothetical protein	-
CXP32_RS09705 (CXP32_09705)	-	1825097..1825288 (-)	192	WP_000291826.1	cell wall-binding protein	-
CXP32_RS09710 (CXP32_09710)	-	1825449..1826078 (-)	630	WP_239424734.1	hypothetical protein	-
CXP32_RS09720 (CXP32_09720)	-	1826134..1827306 (+)	1173	WP_100931674.1	IS256-like element IS256 family transposase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14953.94 Da
• Isoelectric Point: 5.9409

>NTDB_id=259480 CXP32_RS09680 WP_053039748.1 1822229..1822624(-) (ssbB/cilA) [Streptococcus pneumoniae strain Xen35]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREVDFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=259480 CXP32_RS09680 WP_053039748.1 1822229..1822624(-) (ssbB/cilA) [Streptococcus pneumoniae strain Xen35]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGTTGATTTTGTCAATATGGTCCTAT
GGGGCAGGCTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae TIGR4	98.473	100	0.985
ssbB/cilA	Streptococcus mitis SK321	97.71	100	0.977
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	74.046	100	0.74
ssbB	Streptococcus sobrinus strain NIDR 6715-7	69.466	100	0.695
ssbB	Lactococcus lactis subsp. cremoris KW2	58.929	85.496	0.504
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405
ssb	Latilactobacillus sakei subsp. sakei 23K	46.018	86.26	0.397