Detailed information NTG0247900

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: CO686_RS10200
• Genome accession: NZ_CP023507
• Coordinates: 2048886..2049320 (+)
• Length: 144 a.a.
• NCBI ID: WP_172844179.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain FDAARGOS_367
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2043886..2054320

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CO686_RS10175 (CO686_10175)	nagA	2044959..2046110 (+)	1152	WP_001134442.1	N-acetylglucosamine-6-phosphate deacetylase	-
CO686_RS10180 (CO686_10180)	-	2046263..2046628 (+)	366	WP_000286399.1	DUF1033 family protein	-
CO686_RS10185 (CO686_10185)	comGA/cglA/cilD	2046693..2047634 (+)	942	WP_096753791.1	competence type IV pilus ATPase ComGA	Machinery gene
CO686_RS10190 (CO686_10190)	comGB/cglB	2047582..2048598 (+)	1017	WP_096753792.1	competence type IV pilus assembly protein ComGB	Machinery gene
CO686_RS10195 (CO686_10195)	comGC/cglC	2048600..2048923 (+)	324	WP_000735800.1	competence type IV pilus major pilin ComGC	Machinery gene
CO686_RS10200 (CO686_10200)	comGD/cglD	2048886..2049320 (+)	435	WP_172844179.1	competence type IV pilus minor pilin ComGD	Machinery gene
CO686_RS10205 (CO686_10205)	comGE/cglE	2049283..2049585 (+)	303	WP_000413383.1	competence type IV pilus minor pilin ComGE	Machinery gene
CO686_RS10210 (CO686_10210)	comGF/cglF	2049548..2050009 (+)	462	WP_000250700.1	competence type IV pilus minor pilin ComGF	Machinery gene
CO686_RS10215 (CO686_10215)	comGG/cglG	2049987..2050400 (+)	414	WP_000265645.1	competence type IV pilus minor pilin ComGG	Machinery gene
CO686_RS10220 (CO686_10220)	-	2050433..2051023 (+)	591	WP_000679770.1	class I SAM-dependent methyltransferase	-
CO686_RS10225 (CO686_10225)	comYH	2051082..2052035 (+)	954	WP_000345140.1	class I SAM-dependent methyltransferase	Machinery gene

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15837.21 Da
• Isoelectric Point: 10.4335

>NTDB_id=247900 CO686_RS10200 WP_172844179.1 2048886..2049320(+) (comGD/cglD) [Streptococcus oralis strain FDAARGOS_367]
MQNKKQVKLLQIKAFTMFESLLALGLVSILALGLSGSVQSSFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGSQNLTVPKGIQAPSGQSIIFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=247900 CO686_RS10200 WP_172844179.1 2048886..2049320(+) (comGD/cglD) [Streptococcus oralis strain FDAARGOS_367]
ATGCAAAACAAAAAACAAGTCAAACTGTTGCAGATTAAGGCCTTTACCATGTTTGAAAGTCTCTTGGCTTTAGGACTTGT
GAGTATCCTTGCTTTGGGCTTGTCTGGTTCTGTTCAATCCAGTTTTGCAGCGGTAGAAGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTACCGGGAAACGCAAAAACGCAGTGTAGCCAGTCAGCAAAAGACCAGTCTGAACTTAGATGGACAGACG
ATCAGCAATGGCAGTCAAAACTTGACCGTTCCTAAAGGAATTCAGGCACCCTCAGGACAAAGCATTATATTTGACCGAGC
TGGAGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAAACCAGCAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	92.361	100	0.924
comGD/cglD	Streptococcus pneumoniae Rx1	94.737	92.361	0.875
comGD/cglD	Streptococcus pneumoniae D39	94.737	92.361	0.875
comGD/cglD	Streptococcus pneumoniae R6	94.737	92.361	0.875
comGD/cglD	Streptococcus mitis SK321	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae TIGR4	93.985	92.361	0.868
comYD	Streptococcus gordonii str. Challis substr. CH1	56.589	89.583	0.507
comYD	Streptococcus mutans UA140	48.837	89.583	0.437
comYD	Streptococcus mutans UA159	48.837	89.583	0.437