Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CO204_RS01285 | Genome accession | NZ_CP023477 |
| Coordinates | 241600..241995 (+) | Length | 131 a.a. |
| NCBI ID | WP_002263999.1 | Uniprot ID | A0AAX1K1Y7 |
| Organism | Streptococcus mutans strain LAR01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 236600..246995
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO204_RS01245 (CO204_01245) | - | 236699..237361 (+) | 663 | WP_002263446.1 | type II CAAX endopeptidase family protein | - |
| CO204_RS01250 (CO204_01250) | proC | 237446..238216 (-) | 771 | WP_002263447.1 | pyrroline-5-carboxylate reductase | - |
| CO204_RS01255 (CO204_01255) | pepA | 238272..239339 (-) | 1068 | WP_002272112.1 | glutamyl aminopeptidase | - |
| CO204_RS01260 (CO204_01260) | - | 239399..239707 (+) | 309 | WP_002267580.1 | DUF4651 domain-containing protein | - |
| CO204_RS01265 (CO204_01265) | - | 239685..240014 (+) | 330 | WP_002264003.1 | thioredoxin family protein | - |
| CO204_RS01270 (CO204_01270) | ytpR | 240011..240637 (+) | 627 | WP_019313441.1 | YtpR family tRNA-binding protein | - |
| CO204_RS01275 (CO204_01275) | - | 240735..241157 (+) | 423 | WP_025988659.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| CO204_RS01280 (CO204_01280) | - | 241157..241513 (+) | 357 | WP_002264000.1 | rhodanese-like domain-containing protein | - |
| CO204_RS01285 (CO204_01285) | ssbA | 241600..241995 (+) | 396 | WP_002263999.1 | single-stranded DNA-binding protein | Machinery gene |
| CO204_RS01290 (CO204_01290) | - | 242411..243373 (+) | 963 | WP_019313439.1 | sugar ABC transporter substrate-binding protein | - |
| CO204_RS01295 (CO204_01295) | - | 243373..244695 (+) | 1323 | WP_019313438.1 | sensor histidine kinase | - |
| CO204_RS01300 (CO204_01300) | - | 244695..245375 (+) | 681 | WP_002263457.1 | response regulator transcription factor | - |
| CO204_RS01305 (CO204_01305) | - | 245368..246675 (+) | 1308 | WP_002274168.1 | extracellular solute-binding protein | - |
| CO204_RS01310 (CO204_01310) | - | 246741..246944 (+) | 204 | Protein_222 | hypothetical protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14869.91 Da Isoelectric Point: 6.4856
>NTDB_id=247403 CO204_RS01285 WP_002263999.1 241600..241995(+) (ssbA) [Streptococcus mutans strain LAR01]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGERQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGERQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=247403 CO204_RS01285 WP_002263999.1 241600..241995(+) (ssbA) [Streptococcus mutans strain LAR01]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAGGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGCAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAGGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGCAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
99.237 |
100 |
0.992 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
79.389 |
100 |
0.794 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
75.573 |
100 |
0.756 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
75.573 |
100 |
0.756 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
75.573 |
100 |
0.756 |
| ssbB/cilA | Streptococcus mitis SK321 |
75.573 |
100 |
0.756 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
74.046 |
100 |
0.74 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
58.929 |
85.496 |
0.504 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
42.478 |
86.26 |
0.366 |