Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CHF17_RS01500 | Genome accession | NZ_CP022537 |
| Coordinates | 243557..243952 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282447.1 | Uniprot ID | A0AAV3JLT6 |
| Organism | Streptococcus agalactiae strain 874391 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 238557..248952
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CHF17_RS01465 (CHF17_00292) | proC | 238951..239721 (-) | 771 | WP_001869147.1 | pyrroline-5-carboxylate reductase | - |
| CHF17_RS01470 (CHF17_00293) | pepA | 239791..240858 (-) | 1068 | WP_001281321.1 | glutamyl aminopeptidase | - |
| CHF17_RS01475 (CHF17_00294) | - | 241043..241282 (-) | 240 | WP_000660177.1 | hypothetical protein | - |
| CHF17_RS01480 (CHF17_00295) | - | 241443..241727 (+) | 285 | WP_000791273.1 | DUF4651 domain-containing protein | - |
| CHF17_RS01485 (CHF17_00296) | - | 241724..242047 (+) | 324 | WP_000602780.1 | thioredoxin family protein | - |
| CHF17_RS01490 (CHF17_00297) | ytpR | 242080..242706 (+) | 627 | WP_000578325.1 | YtpR family tRNA-binding protein | - |
| CHF17_RS01495 (CHF17_00298) | - | 242760..243476 (-) | 717 | WP_000186176.1 | class I SAM-dependent methyltransferase | - |
| CHF17_RS01500 (CHF17_00299) | ssbA | 243557..243952 (+) | 396 | WP_000282447.1 | single-stranded DNA-binding protein | Machinery gene |
| CHF17_RS01505 (CHF17_00300) | - | 244076..244720 (+) | 645 | WP_000416617.1 | HAD family phosphatase | - |
| CHF17_RS01510 (CHF17_00301) | - | 244747..246492 (+) | 1746 | WP_000930332.1 | LytS/YhcK type 5TM receptor domain-containing protein | - |
| CHF17_RS01515 (CHF17_00302) | - | 246473..247213 (+) | 741 | WP_000697627.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| CHF17_RS01520 (CHF17_00303) | - | 247383..247838 (+) | 456 | WP_000683316.1 | CidA/LrgA family protein | - |
| CHF17_RS01525 (CHF17_00304) | lrgB | 247840..248568 (+) | 729 | WP_000421727.1 | antiholin-like protein LrgB | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14774.80 Da Isoelectric Point: 7.0189
>NTDB_id=240488 CHF17_RS01500 WP_000282447.1 243557..243952(+) (ssbA) [Streptococcus agalactiae strain 874391]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=240488 CHF17_RS01500 WP_000282447.1 243557..243952(+) (ssbA) [Streptococcus agalactiae strain 874391]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTAAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGTTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAATGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTAAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGTTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAATGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.916 |
100 |
0.809 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.099 |
100 |
0.771 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
77.099 |
100 |
0.771 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis SK321 |
76.336 |
100 |
0.763 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.526 |
87.023 |
0.527 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.018 |
86.26 |
0.397 |