Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BB165_RS01090 | Genome accession | NZ_CP021870 |
| Coordinates | 179116..179511 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282450.1 | Uniprot ID | A0AAW6XW90 |
| Organism | Streptococcus agalactiae strain SG-M4 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 174116..184511
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BB165_RS01055 (BB165_01055) | proC | 174510..175280 (-) | 771 | WP_001867096.1 | pyrroline-5-carboxylate reductase | - |
| BB165_RS01060 (BB165_01060) | pepA | 175350..176417 (-) | 1068 | WP_088203006.1 | glutamyl aminopeptidase | - |
| BB165_RS01065 (BB165_01065) | - | 176602..176841 (-) | 240 | WP_000660181.1 | hypothetical protein | - |
| BB165_RS01070 (BB165_01070) | - | 177002..177286 (+) | 285 | WP_000791272.1 | DUF4651 domain-containing protein | - |
| BB165_RS01075 (BB165_01075) | - | 177283..177606 (+) | 324 | WP_000601792.1 | thioredoxin family protein | - |
| BB165_RS01080 (BB165_01080) | ytpR | 177639..178265 (+) | 627 | WP_000578331.1 | YtpR family tRNA-binding protein | - |
| BB165_RS01085 (BB165_01085) | - | 178319..179035 (-) | 717 | WP_000186183.1 | class I SAM-dependent methyltransferase | - |
| BB165_RS01090 (BB165_01090) | ssbA | 179116..179511 (+) | 396 | WP_000282450.1 | single-stranded DNA-binding protein | Machinery gene |
| BB165_RS01095 (BB165_01095) | - | 179634..180278 (+) | 645 | WP_000416612.1 | HAD family hydrolase | - |
| BB165_RS01100 (BB165_01100) | - | 180305..182050 (+) | 1746 | WP_000930334.1 | LytS/YhcK type 5TM receptor domain-containing protein | - |
| BB165_RS01105 (BB165_01105) | - | 182031..182771 (+) | 741 | WP_000697630.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| BB165_RS01110 (BB165_01110) | - | 182941..183396 (+) | 456 | WP_000683316.1 | CidA/LrgA family protein | - |
| BB165_RS01115 (BB165_01115) | lrgB | 183398..184126 (+) | 729 | WP_000421727.1 | antiholin-like protein LrgB | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14790.80 Da Isoelectric Point: 7.0189
>NTDB_id=234265 BB165_RS01090 WP_000282450.1 179116..179511(+) (ssbA) [Streptococcus agalactiae strain SG-M4]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISVDGELRTR
KYEKDGQTHYITEVLASSFQLLESRSQRAMRENNISGDLSDLVLEEEELPF
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISVDGELRTR
KYEKDGQTHYITEVLASSFQLLESRSQRAMRENNISGDLSDLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=234265 BB165_RS01090 WP_000282450.1 179116..179511(+) (ssbA) [Streptococcus agalactiae strain SG-M4]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTAAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAGTAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTTCCCA
ACGTGCTATGCGTGAAAATAACATTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTAAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAGTAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTTCCCA
ACGTGCTATGCGTGAAAATAACATTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.153 |
100 |
0.802 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.099 |
100 |
0.771 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis SK321 |
76.336 |
100 |
0.763 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.649 |
87.023 |
0.519 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
51.402 |
81.679 |
0.42 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |