Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | CA924_RS09495 | Genome accession | NZ_CP021281 |
| Coordinates | 2083903..2084316 (-) | Length | 137 a.a. |
| NCBI ID | WP_011214167.1 | Uniprot ID | - |
| Organism | Legionella pneumophila subsp. pneumophila strain Flint | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2078903..2089316
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CA924_RS09485 | letS | 2079833..2082564 (+) | 2732 | Protein_1827 | two-component system sensor histidine kinase LetS | - |
| CA924_RS09490 | - | 2082662..2083906 (+) | 1245 | WP_011214166.1 | 6-phosphofructokinase | - |
| CA924_RS09495 | pilA2 | 2083903..2084316 (-) | 414 | WP_011214167.1 | pilin | Machinery gene |
| CA924_RS09500 | pilA2 | 2084510..2084920 (-) | 411 | WP_011214168.1 | pilin | Machinery gene |
| CA924_RS09505 | - | 2085223..2085540 (+) | 318 | WP_011214169.1 | BolA/IbaG family iron-sulfur metabolism protein | - |
| CA924_RS09510 | - | 2085615..2087036 (+) | 1422 | WP_011214170.1 | APC family permease | - |
| CA924_RS09515 | - | 2087142..2088572 (-) | 1431 | WP_011214171.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14493.85 Da Isoelectric Point: 6.2016
>NTDB_id=229637 CA924_RS09495 WP_011214167.1 2083903..2084316(-) (pilA2) [Legionella pneumophila subsp. pneumophila strain Flint]
MRTKGFTLIELMIVAAILGILVAIAMPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAMPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=229637 CA924_RS09495 WP_011214167.1 2083903..2084316(-) (pilA2) [Legionella pneumophila subsp. pneumophila strain Flint]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATGCC
AGCCTATCAAGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATTACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATGCC
AGCCTATCAAGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATTACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
72.993 |
100 |
0.73 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.263 |
100 |
0.723 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
45.399 |
100 |
0.54 |
| comP | Acinetobacter baylyi ADP1 |
45.517 |
100 |
0.482 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.184 |
100 |
0.401 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.228 |
100 |
0.372 |
| pilA | Vibrio cholerae C6706 |
34.228 |
100 |
0.372 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.228 |
100 |
0.372 |