Detailed information NTG0223259

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: A6J87_RS06040
• Genome accession: NZ_CP020451
• Coordinates: 1170642..1171034 (+)
• Length: 130 a.a.
• NCBI ID: WP_070576692.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain FDAARGOS_259
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1165642..1176034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J87_RS06010 (A6J87_05985)	pepA	1166325..1167392 (-)	1068	WP_013991256.1	glutamyl aminopeptidase	-
A6J87_RS06015 (A6J87_05990)	-	1167492..1167776 (+)	285	WP_080611751.1	DUF4651 domain-containing protein	-
A6J87_RS06020 (A6J87_05995)	-	1167773..1168087 (+)	315	WP_013991254.1	thioredoxin family protein	-
A6J87_RS06025 (A6J87_06000)	-	1168091..1168615 (+)	525	WP_080611753.1	hypothetical protein	-
A6J87_RS06030 (A6J87_06005)	ytpR	1168648..1169271 (+)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
A6J87_RS06035 (A6J87_06010)	-	1169537..1170214 (+)	678	WP_070576695.1	CPBP family intramembrane glutamic endopeptidase	-
A6J87_RS06040 (A6J87_06015)	ssbA	1170642..1171034 (+)	393	WP_070576692.1	single-stranded DNA-binding protein	Machinery gene
A6J87_RS06045 (A6J87_06020)	tadA	1171804..1172322 (+)	519	WP_060971580.1	tRNA adenosine(34) deaminase TadA	-
A6J87_RS11100 (A6J87_06025)	-	1172408..1172662 (-)	255	WP_070576689.1	hypothetical protein	-
A6J87_RS06055 (A6J87_06030)	-	1172710..1172877 (-)	168	WP_002892002.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
A6J87_RS06060 (A6J87_06035)	-	1172898..1173056 (-)	159	WP_080611755.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
A6J87_RS06070 (A6J87_06045)	-	1173477..1174316 (+)	840	WP_070576686.1	methyltransferase domain-containing protein	-
A6J87_RS06075 (A6J87_06050)	-	1174430..1175182 (+)	753	WP_070576682.1	HAD family hydrolase	-
A6J87_RS06080 (A6J87_06055)	dapD	1175268..1175966 (+)	699	WP_070576679.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14700.60 Da
• Isoelectric Point: 5.2628

>NTDB_id=223259 A6J87_RS06040 WP_070576692.1 1170642..1171034(+) (ssbA) [Streptococcus salivarius strain FDAARGOS_259]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGPLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=223259 A6J87_RS06040 WP_070576692.1 1170642..1171034(+) (ssbA) [Streptococcus salivarius strain FDAARGOS_259]
ATGTATAACAAAGTAATTTTAATTGGACGTTTGACAGCTACTCCTGAAATGGTTAAGACTGCTAGCGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCCTTTGGCTGAGACCTTAGCCTCTTATGCAAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGCCAAACCCATTACGTTACTGAGGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAGAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.153	100	0.808
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.754
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.754
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	47.17	81.538	0.385
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385