Detailed information NTG0223092

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: A6J82_RS00780
• Genome accession: NZ_CP020449
• Coordinates: 133634..134029 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282446.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain FDAARGOS_254
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 128634..139029

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J82_RS00755 (A6J82_00765)	lrgB	129018..129746 (-)	729	WP_000421730.1	antiholin-like protein LrgB	-
A6J82_RS00760 (A6J82_00770)	-	129748..130203 (-)	456	WP_000683317.1	CidA/LrgA family protein	-
A6J82_RS00765 (A6J82_00775)	-	130373..131113 (-)	741	WP_000697628.1	LytTR family DNA-binding domain-containing protein	-
A6J82_RS00770 (A6J82_00780)	-	131094..132839 (-)	1746	WP_000930328.1	LytS/YhcK type 5TM receptor domain-containing protein	-
A6J82_RS00775 (A6J82_00785)	-	132866..133510 (-)	645	WP_000416614.1	HAD family phosphatase	-
A6J82_RS00780 (A6J82_00790)	ssbA	133634..134029 (-)	396	WP_000282446.1	single-stranded DNA-binding protein	Machinery gene
A6J82_RS00785 (A6J82_00795)	-	134110..134825 (+)	716	Protein_129	class I SAM-dependent methyltransferase	-
A6J82_RS00790 (A6J82_00800)	ytpR	134879..135505 (-)	627	WP_000578324.1	YtpR family tRNA-binding protein	-
A6J82_RS00795 (A6J82_00805)	-	135538..135861 (-)	324	WP_000602780.1	thioredoxin family protein	-
A6J82_RS00800 (A6J82_00810)	-	135858..136142 (-)	285	WP_000791272.1	DUF4651 domain-containing protein	-
A6J82_RS00805 (A6J82_00815)	-	136303..136542 (+)	240	WP_000660182.1	hypothetical protein	-
A6J82_RS00810 (A6J82_00820)	pepA	136727..137794 (+)	1068	WP_001281321.1	glutamyl aminopeptidase	-
A6J82_RS00815 (A6J82_00825)	proC	137864..138634 (+)	771	WP_001881026.1	pyrroline-5-carboxylate reductase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14735.78 Da
• Isoelectric Point: 5.9381

>NTDB_id=223092 A6J82_RS00780 WP_000282446.1 133634..134029(-) (ssbA) [Streptococcus agalactiae strain FDAARGOS_254]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWARLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQCAMRENNVSGDLSDLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=223092 A6J82_RS00780 WP_000282446.1 133634..134029(-) (ssbA) [Streptococcus agalactiae strain FDAARGOS_254]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTGAC
ACGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGCTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGTTAGAAAGCCGTGCCCA
ATGTGCTATGCGTGAAAATAATGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	79.389	100	0.794
ssbB/cilA	Streptococcus pneumoniae R6	76.336	100	0.763
ssbB/cilA	Streptococcus pneumoniae Rx1	76.336	100	0.763
ssbB/cilA	Streptococcus pneumoniae D39	76.336	100	0.763
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.756
ssbB	Streptococcus sobrinus strain NIDR 6715-7	75.573	100	0.756
ssbB/cilA	Streptococcus mitis NCTC 12261	74.809	100	0.748
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.748
ssbB	Lactococcus lactis subsp. cremoris KW2	59.649	87.023	0.519
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.943	80.916	0.412
ssb	Latilactobacillus sakei subsp. sakei 23K	46.018	86.26	0.397