Detailed information NTG0206942

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: BSR20_RS09460
• Genome accession: NZ_CP018189
• Coordinates: 2042466..2042858 (-)
• Length: 130 a.a.
• NCBI ID: WP_049529272.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ICDC3
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2037466..2047858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR20_RS09420 (BSR20_09525)	dapD	2037535..2038233 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
BSR20_RS09425 (BSR20_09530)	-	2038319..2039071 (-)	753	WP_002887000.1	HAD family hydrolase	-
BSR20_RS09430 (BSR20_09535)	-	2039185..2040024 (-)	840	WP_002887001.1	methyltransferase domain-containing protein	-
BSR20_RS09440 (BSR20_09545)	-	2040445..2040603 (+)	159	WP_002885650.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
BSR20_RS09445 (BSR20_09550)	-	2040623..2040790 (+)	168	WP_002887002.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
BSR20_RS09450 (BSR20_09555)	-	2040838..2041092 (+)	255	WP_045001373.1	hypothetical protein	-
BSR20_RS09455 (BSR20_09560)	tadA	2041178..2041696 (-)	519	WP_049529273.1	tRNA adenosine(34) deaminase TadA	-
BSR20_RS09460 (BSR20_09565)	ssbA	2042466..2042858 (-)	393	WP_049529272.1	single-stranded DNA-binding protein	Machinery gene
BSR20_RS09465 (BSR20_09570)	-	2043088..2043315 (-)	228	WP_003095911.1	sulfurtransferase TusA family protein	-
BSR20_RS09470 (BSR20_09575)	-	2043330..2044361 (-)	1032	WP_049529271.1	YeeE/YedE family protein	-
BSR20_RS09475 (BSR20_09580)	ytpR	2044499..2045122 (-)	624	WP_049529270.1	YtpR family tRNA-binding protein	-
BSR20_RS09480 (BSR20_09585)	-	2045132..2045446 (-)	315	WP_045771798.1	thioredoxin family protein	-
BSR20_RS09485 (BSR20_09590)	-	2045443..2045727 (-)	285	WP_045771799.1	DUF4651 domain-containing protein	-
BSR20_RS09490 (BSR20_09595)	pepA	2045827..2046894 (+)	1068	WP_045771800.1	glutamyl aminopeptidase	-
BSR20_RS09495 (BSR20_09600)	proC	2046910..2047680 (+)	771	WP_045771801.1	pyrroline-5-carboxylate reductase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14773.70 Da
• Isoelectric Point: 5.9220

>NTDB_id=206942 BSR20_RS09460 WP_049529272.1 2042466..2042858(-) (ssbA) [Streptococcus salivarius strain ICDC3]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGDREADFITVVVWGRLAETLVSYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=206942 BSR20_RS09460 WP_049529272.1 2042466..2042858(-) (ssbA) [Streptococcus salivarius strain ICDC3]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGATCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGTATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGGGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTCAAACCCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAGCTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	79.389	100	0.8
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus pneumoniae TIGR4	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae Rx1	74.046	100	0.746
ssbB/cilA	Streptococcus pneumoniae D39	74.046	100	0.746
ssbB/cilA	Streptococcus pneumoniae R6	74.046	100	0.746
ssbB/cilA	Streptococcus mitis SK321	74.046	100	0.746
ssbB/cilA	Streptococcus mitis NCTC 12261	72.519	100	0.731
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385
ssbA	Bacillus subtilis subsp. subtilis str. 168	46.226	81.538	0.377