Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BSR19_RS09640 | Genome accession | NZ_CP018187 |
| Coordinates | 2095950..2096342 (-) | Length | 130 a.a. |
| NCBI ID | WP_014632554.1 | Uniprot ID | A0AB37DE84 |
| Organism | Streptococcus salivarius strain ICDC2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2090950..2101342
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSR19_RS09600 (BSR19_09730) | dapD | 2091006..2091704 (-) | 699 | WP_060973061.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | - |
| BSR19_RS09605 (BSR19_09735) | - | 2091790..2092542 (-) | 753 | WP_037598514.1 | HAD family hydrolase | - |
| BSR19_RS09610 (BSR19_09740) | - | 2092656..2093495 (-) | 840 | WP_156247044.1 | methyltransferase domain-containing protein | - |
| BSR19_RS09620 (BSR19_09750) | - | 2093916..2094074 (+) | 159 | WP_002885650.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| BSR19_RS09625 (BSR19_09755) | - | 2094094..2094261 (+) | 168 | WP_002887002.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| BSR19_RS09630 (BSR19_09760) | - | 2094309..2094563 (+) | 255 | WP_045001373.1 | hypothetical protein | - |
| BSR19_RS09635 (BSR19_09765) | tadA | 2094649..2095167 (-) | 519 | WP_014632555.1 | tRNA adenosine(34) deaminase TadA | - |
| BSR19_RS09640 (BSR19_09770) | ssbA | 2095950..2096342 (-) | 393 | WP_014632554.1 | single-stranded DNA-binding protein | Machinery gene |
| BSR19_RS09645 (BSR19_09775) | - | 2096770..2097447 (-) | 678 | WP_045001371.1 | CPBP family intramembrane glutamic endopeptidase | - |
| BSR19_RS09650 (BSR19_09780) | ytpR | 2097713..2098336 (-) | 624 | WP_002885779.1 | YtpR family tRNA-binding protein | - |
| BSR19_RS09655 (BSR19_09785) | - | 2098368..2098892 (-) | 525 | WP_156247045.1 | hypothetical protein | - |
| BSR19_RS09660 (BSR19_09790) | - | 2098896..2099210 (-) | 315 | WP_002885723.1 | thioredoxin family protein | - |
| BSR19_RS09665 (BSR19_09795) | - | 2099207..2099491 (-) | 285 | WP_002885838.1 | DUF4651 domain-containing protein | - |
| BSR19_RS09670 (BSR19_09800) | pepA | 2099591..2100658 (+) | 1068 | WP_014632550.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 130 a.a. Molecular weight: 14759.71 Da Isoelectric Point: 6.9843
>NTDB_id=206873 BSR19_RS09640 WP_014632554.1 2095950..2096342(-) (ssbA) [Streptococcus salivarius strain ICDC2]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGKTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGKTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF
Nucleotide
Download Length: 393 bp
>NTDB_id=206873 BSR19_RS09640 WP_014632554.1 2095950..2096342(-) (ssbA) [Streptococcus salivarius strain ICDC2]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGATTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTAAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAGCTTCCCTTCTAG
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGATTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTAAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAGCTTCCCTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.916 |
100 |
0.815 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
75.573 |
100 |
0.762 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
75.573 |
100 |
0.762 |
| ssbB/cilA | Streptococcus mitis SK321 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
74.809 |
100 |
0.754 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
73.282 |
100 |
0.738 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.714 |
86.154 |
0.523 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
47.17 |
81.538 |
0.385 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.226 |
81.538 |
0.377 |