Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BKJ37_RS01515 | Genome accession | NZ_CP018143 |
| Coordinates | 328328..328762 (+) | Length | 144 a.a. |
| NCBI ID | WP_000993717.1 | Uniprot ID | A0AAN5WG10 |
| Organism | Acinetobacter baumannii strain HRAB-85 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 323328..333762
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKJ37_RS01495 (BKJ37_01485) | - | 324720..325607 (+) | 888 | WP_001017314.1 | metal-dependent hydrolase | - |
| BKJ37_RS01500 (BKJ37_01490) | - | 325738..326328 (+) | 591 | WP_000846931.1 | LemA family protein | - |
| BKJ37_RS01505 (BKJ37_01495) | - | 326350..327432 (+) | 1083 | WP_001246375.1 | TPM domain-containing protein | - |
| BKJ37_RS01510 (BKJ37_01500) | - | 327426..327986 (+) | 561 | WP_000258955.1 | TPM domain-containing protein | - |
| BKJ37_RS01515 (BKJ37_01505) | pilA | 328328..328762 (+) | 435 | WP_000993717.1 | pilin | Machinery gene |
| BKJ37_RS01520 (BKJ37_01510) | - | 328820..330130 (+) | 1311 | WP_000914629.1 | O-antigen ligase family protein | - |
| BKJ37_RS01525 (BKJ37_01515) | - | 330238..331902 (+) | 1665 | WP_050495856.1 | PglL family O-oligosaccharyltransferase | - |
| BKJ37_RS20060 | - | 331936..333026 (+) | 1091 | WP_085940413.1 | IS4-like element ISAba1 family transposase | - |
| BKJ37_RS01540 (BKJ37_01530) | bfr | 333097..333561 (-) | 465 | WP_000678123.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 14873.98 Da Isoelectric Point: 8.1106
>NTDB_id=206310 BKJ37_RS01515 WP_000993717.1 328328..328762(+) (pilA) [Acinetobacter baumannii strain HRAB-85]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEGLTAALTDVTTLGLQQSTNAC
AITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATNGTTGAWRCKTDVAENLRPKSCGAS
Nucleotide
Download Length: 435 bp
>NTDB_id=206310 BKJ37_RS01515 WP_000993717.1 328328..328762(+) (pilA) [Acinetobacter baumannii strain HRAB-85]
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
ATGAATGCACAAAAAGGTTTTACATTAATCGAACTTATGATCGTGGTTGCCATTATTGGTATTTTGGCAGCAATTGCGAT
TCCTGCTTATCAAAACTACATTGCTAAGTCACAAGTAAGTACTGGTTTAGCTGATATTACTGCTGGTAAGACAAATGCAG
AAACTAAATTAGCAGAAGGTTTAACTGCGGCATTAACTGATGTAACAACTTTAGGTTTACAACAATCTACGAATGCTTGT
GCTATTACAGCCAATATTGGAACTAATGGTGCAAGTAATATTACTTGTACATTGAAAGGTACATCACAAATTAATGGTAA
AAAAATTGAATGGATCCGTGATGCAGATAATGCTACAAATGGTACGACAGGTGCTTGGCGCTGTAAAACTGATGTAGCTG
AAAACTTACGTCCTAAATCATGTGGTGCTTCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Acinetobacter baumannii strain A118 |
53.061 |
100 |
0.542 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae strain A1552 |
44.966 |
100 |
0.465 |
| pilA | Vibrio cholerae C6706 |
44.966 |
100 |
0.465 |
| pilA | Pseudomonas aeruginosa PAK |
41.558 |
100 |
0.444 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
44.366 |
98.611 |
0.437 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.431 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
42.553 |
97.917 |
0.417 |
| pilA | Vibrio campbellii strain DS40M4 |
40.278 |
100 |
0.403 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
44 |
86.806 |
0.382 |