Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | BMJ42_RS10230 | Genome accession | NZ_CP018136 |
| Coordinates | 1851478..1851873 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain SP49 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1846478..1856873
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMJ42_RS10200 (BMJ42_01939) | - | 1846701..1847234 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| BMJ42_RS13875 (BMJ42_01940) | - | 1847592..1847798 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| BMJ42_RS10210 (BMJ42_01941) | - | 1847958..1849187 (+) | 1230 | WP_000436323.1 | ISL3 family transposase | - |
| BMJ42_RS10215 (BMJ42_01942) | groL | 1849286..1850908 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| BMJ42_RS10220 (BMJ42_01943) | groES | 1850924..1851208 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| BMJ42_RS10230 (BMJ42_01944) | ssbB/cilA | 1851478..1851873 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| BMJ42_RS10235 (BMJ42_01945) | - | 1851951..1852712 (-) | 762 | WP_001107757.1 | SDR family oxidoreductase | - |
| BMJ42_RS10240 (BMJ42_01946) | ytpR | 1852745..1853371 (-) | 627 | WP_000578302.1 | YtpR family tRNA-binding protein | - |
| BMJ42_RS10245 (BMJ42_01947) | - | 1853387..1853704 (-) | 318 | WP_000615774.1 | thioredoxin family protein | - |
| BMJ42_RS10250 (BMJ42_01948) | - | 1853701..1854000 (-) | 300 | WP_001818001.1 | DUF4651 domain-containing protein | - |
| BMJ42_RS13650 | - | 1854094..1854225 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| BMJ42_RS13540 | - | 1854337..1854482 (-) | 146 | Protein_1903 | cell wall-binding protein | - |
| BMJ42_RS10270 (BMJ42_01949) | - | 1854694..1855368 (-) | 675 | WP_000725722.1 | LiaF transmembrane domain-containing protein | - |
| BMJ42_RS10275 (BMJ42_01950) | - | 1855374..1855820 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| BMJ42_RS10280 (BMJ42_01951) | - | 1855934..1856437 (-) | 504 | WP_000800939.1 | phosphatase PAP2 family protein | - |
| BMJ42_RS10285 (BMJ42_01952) | - | 1856434..1856796 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=206079 BMJ42_RS10230 WP_000282467.1 1851478..1851873(-) (ssbB/cilA) [Streptococcus pneumoniae strain SP49]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=206079 BMJ42_RS10230 WP_000282467.1 1851478..1851873(-) (ssbB/cilA) [Streptococcus pneumoniae strain SP49]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |