Detailed information
Bioinformatically predicted
Overview
| Name | comEA/comE1 | Type | Machinery gene |
| Locus tag | BG577_RS11215 | Genome accession | NZ_CP017498 |
| Coordinates | 2234377..2234715 (+) | Length | 112 a.a. |
| NCBI ID | WP_006251644.1 | Uniprot ID | A0A248ZWT2 |
| Organism | Mannheimia haemolytica strain 33980 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2229377..2239715
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG577_RS11190 (BG577_10905) | rpsL | 2229619..2229993 (-) | 375 | WP_005543325.1 | 30S ribosomal protein S12 | - |
| BG577_RS11195 (BG577_10910) | rfaC | 2230114..2231073 (-) | 960 | WP_006250332.1 | lipopolysaccharide heptosyltransferase RfaC | - |
| BG577_RS11200 (BG577_10915) | waaF | 2231141..2232178 (-) | 1038 | WP_020824266.1 | lipopolysaccharide heptosyltransferase II | - |
| BG577_RS11205 (BG577_10920) | - | 2232289..2232705 (-) | 417 | WP_020824267.1 | MliC family protein | - |
| BG577_RS11210 (BG577_10925) | - | 2232765..2234084 (-) | 1320 | WP_006251645.1 | LysM-like peptidoglycan-binding domain-containing protein | - |
| BG577_RS11215 (BG577_10930) | comEA/comE1 | 2234377..2234715 (+) | 339 | WP_006251644.1 | ComEA family DNA-binding protein | Machinery gene |
| BG577_RS11220 (BG577_10935) | asd | 2234880..2235773 (+) | 894 | WP_006251643.1 | archaetidylserine decarboxylase | - |
| BG577_RS11225 (BG577_10940) | hsdR | 2235845..2238196 (+) | 2352 | WP_006250003.1 | EcoAI/FtnUII family type I restriction enzme subunit R | - |
| BG577_RS11230 (BG577_10945) | - | 2238244..2239713 (+) | 1470 | WP_006251642.1 | HsdM family class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 112 a.a. Molecular weight: 12111.91 Da Isoelectric Point: 10.0993
>NTDB_id=199075 BG577_RS11215 WP_006251644.1 2234377..2234715(+) (comEA/comE1) [Mannheimia haemolytica strain 33980]
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
MKKIKQLGLTFLFGLNAMAFAQTPPTTMPVEQNAVTQPVQQTQITNANAVNINTASAAELQDKLVGIGQKKAQAIVDYRT
KNGNFKNIEQLAEVSGIGQATVEKNRANIILE
Nucleotide
Download Length: 339 bp
>NTDB_id=199075 BG577_RS11215 WP_006251644.1 2234377..2234715(+) (comEA/comE1) [Mannheimia haemolytica strain 33980]
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
ATGAAGAAAATCAAACAACTTGGTCTAACATTCTTGTTTGGCTTAAATGCAATGGCTTTTGCCCAAACACCGCCAACTAC
AATGCCTGTTGAACAAAATGCAGTCACTCAACCCGTACAGCAAACACAAATCACCAACGCCAATGCGGTAAATATCAATA
CTGCTAGTGCTGCTGAATTGCAAGACAAGCTAGTGGGAATTGGGCAGAAAAAAGCTCAAGCGATTGTCGATTACCGTACT
AAAAACGGCAATTTTAAAAACATTGAGCAACTTGCTGAAGTCTCCGGAATTGGGCAAGCAACGGTAGAAAAAAATCGAGC
CAATATTATTTTAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
59.292 |
100 |
0.598 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.747 |
81.25 |
0.429 |
| comEA | Vibrio cholerae C6706 |
54.651 |
76.786 |
0.42 |
| comEA | Vibrio cholerae strain A1552 |
54.651 |
76.786 |
0.42 |