Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | BJG87_RS06150 | Genome accession | NZ_CP017463 |
| Coordinates | 1248325..1248636 (+) | Length | 103 a.a. |
| NCBI ID | WP_029055749.1 | Uniprot ID | - |
| Organism | Staphylococcus pasteuri strain JS7 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1243325..1253636
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJG87_RS06120 (BJG87_06010) | - | 1244105..1244308 (+) | 204 | WP_017636256.1 | YqgQ family protein | - |
| BJG87_RS06125 (BJG87_06015) | - | 1244305..1245291 (+) | 987 | WP_017636255.1 | ROK family glucokinase | - |
| BJG87_RS06130 (BJG87_06020) | - | 1245291..1245614 (+) | 324 | WP_017636254.1 | MTH1187 family thiamine-binding protein | - |
| BJG87_RS06135 (BJG87_06025) | - | 1245618..1246241 (+) | 624 | WP_017636253.1 | MBL fold metallo-hydrolase | - |
| BJG87_RS06140 (BJG87_06030) | comGA | 1246288..1247262 (+) | 975 | WP_046466733.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BJG87_RS06145 (BJG87_06035) | comGB | 1247234..1248301 (+) | 1068 | WP_096807788.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BJG87_RS06150 (BJG87_06040) | comGC | 1248325..1248636 (+) | 312 | WP_029055749.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BJG87_RS13125 (BJG87_06045) | comGD | 1248614..1249063 (+) | 450 | WP_177244131.1 | competence type IV pilus minor pilin ComGD | - |
| BJG87_RS13015 (BJG87_06050) | - | 1249095..1249343 (+) | 249 | WP_157772502.1 | hypothetical protein | - |
| BJG87_RS06170 (BJG87_06060) | - | 1249917..1250435 (+) | 519 | WP_046466730.1 | shikimate kinase | - |
| BJG87_RS06175 (BJG87_06065) | gcvT | 1250607..1251698 (+) | 1092 | WP_046466729.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| BJG87_RS06180 (BJG87_06070) | gcvPA | 1251717..1253066 (+) | 1350 | WP_046466728.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11485.49 Da Isoelectric Point: 8.5268
>NTDB_id=198525 BJG87_RS06150 WP_029055749.1 1248325..1248636(+) (comGC) [Staphylococcus pasteuri strain JS7]
MFKTLFNKKAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQTTGCDAQVKMVNSQIEAYTLKHNRNPNTIQDLISEGFI
KENQKNCKSGETISINNGEAVAN
MFKTLFNKKAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQTTGCDAQVKMVNSQIEAYTLKHNRNPNTIQDLISEGFI
KENQKNCKSGETISINNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=198525 BJG87_RS06150 WP_029055749.1 1248325..1248636(+) (comGC) [Staphylococcus pasteuri strain JS7]
ATATTCAAAACACTGTTTAACAAAAAGGCATTTACATTAATTGAAATGTTACTAGTTTTATTAATAATTAGCTTATTGCT
TATTCTAATTATTCCCAATATAGCTAAACAAACCGCTCATATACAAACTACTGGTTGTGACGCTCAAGTGAAAATGGTTA
ATAGTCAAATTGAAGCATATACTTTAAAACACAATAGAAATCCTAATACCATCCAAGATTTAATTTCTGAAGGATTTATT
AAAGAAAACCAAAAAAATTGCAAATCAGGAGAAACTATTAGTATTAATAATGGCGAAGCGGTTGCAAATTAA
ATATTCAAAACACTGTTTAACAAAAAGGCATTTACATTAATTGAAATGTTACTAGTTTTATTAATAATTAGCTTATTGCT
TATTCTAATTATTCCCAATATAGCTAAACAAACCGCTCATATACAAACTACTGGTTGTGACGCTCAAGTGAAAATGGTTA
ATAGTCAAATTGAAGCATATACTTTAAAACACAATAGAAATCCTAATACCATCCAAGATTTAATTTCTGAAGGATTTATT
AAAGAAAACCAAAAAAATTGCAAATCAGGAGAAACTATTAGTATTAATAATGGCGAAGCGGTTGCAAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
83.495 |
100 |
0.835 |
| comGC | Staphylococcus aureus MW2 |
83.495 |
100 |
0.835 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
45.361 |
94.175 |
0.427 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
43.617 |
91.262 |
0.398 |
| comGC/cglC | Streptococcus pneumoniae R6 |
43.478 |
89.32 |
0.388 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
43.478 |
89.32 |
0.388 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
43.478 |
89.32 |
0.388 |
| comGC/cglC | Streptococcus pneumoniae D39 |
43.478 |
89.32 |
0.388 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
42.105 |
92.233 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
51.316 |
73.786 |
0.379 |
| comYC | Streptococcus mutans UA140 |
48.101 |
76.699 |
0.369 |
| comYC | Streptococcus mutans UA159 |
48.101 |
76.699 |
0.369 |