Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | BJG87_RS06145 | Genome accession | NZ_CP017463 |
| Coordinates | 1247234..1248301 (+) | Length | 355 a.a. |
| NCBI ID | WP_096807788.1 | Uniprot ID | A0AAW7YQL2 |
| Organism | Staphylococcus pasteuri strain JS7 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1242234..1253301
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BJG87_RS06115 (BJG87_06005) | - | 1242661..1244115 (+) | 1455 | WP_029055746.1 | rhomboid family protein | - |
| BJG87_RS06120 (BJG87_06010) | - | 1244105..1244308 (+) | 204 | WP_017636256.1 | YqgQ family protein | - |
| BJG87_RS06125 (BJG87_06015) | - | 1244305..1245291 (+) | 987 | WP_017636255.1 | ROK family glucokinase | - |
| BJG87_RS06130 (BJG87_06020) | - | 1245291..1245614 (+) | 324 | WP_017636254.1 | MTH1187 family thiamine-binding protein | - |
| BJG87_RS06135 (BJG87_06025) | - | 1245618..1246241 (+) | 624 | WP_017636253.1 | MBL fold metallo-hydrolase | - |
| BJG87_RS06140 (BJG87_06030) | comGA | 1246288..1247262 (+) | 975 | WP_046466733.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BJG87_RS06145 (BJG87_06035) | comGB | 1247234..1248301 (+) | 1068 | WP_096807788.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| BJG87_RS06150 (BJG87_06040) | comGC | 1248325..1248636 (+) | 312 | WP_029055749.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BJG87_RS13125 (BJG87_06045) | comGD | 1248614..1249063 (+) | 450 | WP_177244131.1 | competence type IV pilus minor pilin ComGD | - |
| BJG87_RS13015 (BJG87_06050) | - | 1249095..1249343 (+) | 249 | WP_157772502.1 | hypothetical protein | - |
| BJG87_RS06170 (BJG87_06060) | - | 1249917..1250435 (+) | 519 | WP_046466730.1 | shikimate kinase | - |
| BJG87_RS06175 (BJG87_06065) | gcvT | 1250607..1251698 (+) | 1092 | WP_046466729.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| BJG87_RS06180 (BJG87_06070) | gcvPA | 1251717..1253066 (+) | 1350 | WP_046466728.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 42140.90 Da Isoelectric Point: 9.3128
>NTDB_id=198524 BJG87_RS06145 WP_096807788.1 1247234..1248301(+) (comGB) [Staphylococcus pasteuri strain JS7]
MKLLLINIFKFRQSKCLTKSEQLDLVYRLHQLLKHGFTLYESFKFLNLHFKYRGDKSHDEVLNKIEQGATCWEVFKYLDY
SSDIVTQTYLAERFGNLELSLLEATRYLKKQIQVTQNVLKTIQYPIVLIITFILILTLLNFTVIPQFKELYQSMNIELSP
LQSILSYFITTFPLFIIILSSVICILSIIFKYRFNKMTIENQIQLMCHIPIIKHYYKILKTYQLSNEFAHFYRNGVNLQI
IVRIYKQSENNQFHQFLGDRLLNQSYQGENLPDILKKLNCYENDLIKFIEQGEKSGKLDIELTLYSQILIQQFEAMAKRH
IKFIQPVIFLILGLFIVALYLTIMLPIFDMLQSIK
MKLLLINIFKFRQSKCLTKSEQLDLVYRLHQLLKHGFTLYESFKFLNLHFKYRGDKSHDEVLNKIEQGATCWEVFKYLDY
SSDIVTQTYLAERFGNLELSLLEATRYLKKQIQVTQNVLKTIQYPIVLIITFILILTLLNFTVIPQFKELYQSMNIELSP
LQSILSYFITTFPLFIIILSSVICILSIIFKYRFNKMTIENQIQLMCHIPIIKHYYKILKTYQLSNEFAHFYRNGVNLQI
IVRIYKQSENNQFHQFLGDRLLNQSYQGENLPDILKKLNCYENDLIKFIEQGEKSGKLDIELTLYSQILIQQFEAMAKRH
IKFIQPVIFLILGLFIVALYLTIMLPIFDMLQSIK
Nucleotide
Download Length: 1068 bp
>NTDB_id=198524 BJG87_RS06145 WP_096807788.1 1247234..1248301(+) (comGB) [Staphylococcus pasteuri strain JS7]
GTGAAACTATTGCTGATAAATATATTTAAATTCAGACAATCCAAATGCCTAACTAAATCTGAACAATTAGATTTAGTGTA
TAGATTACATCAATTACTTAAACATGGATTTACTCTTTACGAATCATTTAAATTTTTAAATCTACATTTTAAATATAGAG
GAGATAAATCACATGATGAAGTGTTAAATAAAATAGAACAAGGTGCAACTTGCTGGGAAGTATTTAAATACTTAGATTAT
TCAAGTGACATTGTTACACAAACATATTTAGCTGAAAGATTTGGAAATTTAGAACTTTCTCTATTAGAAGCTACAAGATA
TTTAAAAAAGCAAATACAAGTTACTCAAAATGTTTTAAAGACGATACAGTATCCTATTGTATTAATAATTACTTTTATAT
TAATATTAACGTTACTCAATTTTACAGTTATACCTCAATTTAAAGAATTATACCAATCTATGAATATAGAACTTTCTCCA
TTACAATCTATTCTTTCTTATTTTATTACAACTTTCCCTTTATTCATCATAATTTTATCCAGTGTAATATGTATATTATC
TATCATATTTAAATATCGTTTTAATAAGATGACTATAGAAAATCAAATTCAATTAATGTGTCACATTCCAATTATTAAAC
ATTATTATAAAATTTTAAAAACGTATCAATTATCAAATGAGTTTGCCCATTTTTATAGAAATGGAGTTAATTTACAGATA
ATCGTTAGAATTTATAAACAATCAGAGAATAATCAATTTCATCAATTTTTAGGAGACAGGTTACTCAACCAATCTTATCA
AGGAGAAAATCTACCTGATATATTAAAAAAATTAAATTGCTATGAAAATGACTTGATTAAATTTATAGAACAAGGAGAAA
AAAGTGGAAAACTTGATATCGAATTAACGCTATATAGTCAGATACTTATACAACAATTCGAAGCTATGGCTAAAAGACAC
ATTAAATTCATTCAACCAGTTATCTTTTTAATATTAGGATTATTTATCGTTGCACTTTATTTAACTATTATGCTACCTAT
ATTTGACATGTTGCAGTCAATTAAATAG
GTGAAACTATTGCTGATAAATATATTTAAATTCAGACAATCCAAATGCCTAACTAAATCTGAACAATTAGATTTAGTGTA
TAGATTACATCAATTACTTAAACATGGATTTACTCTTTACGAATCATTTAAATTTTTAAATCTACATTTTAAATATAGAG
GAGATAAATCACATGATGAAGTGTTAAATAAAATAGAACAAGGTGCAACTTGCTGGGAAGTATTTAAATACTTAGATTAT
TCAAGTGACATTGTTACACAAACATATTTAGCTGAAAGATTTGGAAATTTAGAACTTTCTCTATTAGAAGCTACAAGATA
TTTAAAAAAGCAAATACAAGTTACTCAAAATGTTTTAAAGACGATACAGTATCCTATTGTATTAATAATTACTTTTATAT
TAATATTAACGTTACTCAATTTTACAGTTATACCTCAATTTAAAGAATTATACCAATCTATGAATATAGAACTTTCTCCA
TTACAATCTATTCTTTCTTATTTTATTACAACTTTCCCTTTATTCATCATAATTTTATCCAGTGTAATATGTATATTATC
TATCATATTTAAATATCGTTTTAATAAGATGACTATAGAAAATCAAATTCAATTAATGTGTCACATTCCAATTATTAAAC
ATTATTATAAAATTTTAAAAACGTATCAATTATCAAATGAGTTTGCCCATTTTTATAGAAATGGAGTTAATTTACAGATA
ATCGTTAGAATTTATAAACAATCAGAGAATAATCAATTTCATCAATTTTTAGGAGACAGGTTACTCAACCAATCTTATCA
AGGAGAAAATCTACCTGATATATTAAAAAAATTAAATTGCTATGAAAATGACTTGATTAAATTTATAGAACAAGGAGAAA
AAAGTGGAAAACTTGATATCGAATTAACGCTATATAGTCAGATACTTATACAACAATTCGAAGCTATGGCTAAAAGACAC
ATTAAATTCATTCAACCAGTTATCTTTTTAATATTAGGATTATTTATCGTTGCACTTTATTTAACTATTATGCTACCTAT
ATTTGACATGTTGCAGTCAATTAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
48.315 |
100 |
0.485 |
| comGB | Staphylococcus aureus N315 |
48.315 |
100 |
0.485 |