Detailed information
Bioinformatically predicted
Overview
| Name | ssbB | Type | Machinery gene |
| Locus tag | BC359_RS02045 | Genome accession | NZ_CP016790 |
| Coordinates | 401698..402042 (+) | Length | 114 a.a. |
| NCBI ID | WP_025908776.1 | Uniprot ID | A0A8I1MIH1 |
| Organism | Priestia flexa strain KLBMP 4941 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 396698..407042
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BC359_RS02015 (BC359_02030) | - | 396719..397534 (+) | 816 | WP_061785672.1 | flagellar hook-basal body protein | - |
| BC359_RS02020 (BC359_02035) | - | 397566..398390 (+) | 825 | WP_025908772.1 | flagellar hook-basal body protein | - |
| BC359_RS02025 (BC359_02040) | - | 398566..399690 (+) | 1125 | WP_078989081.1 | IS4-like element IS4Bsu1 family transposase | - |
| BC359_RS02030 (BC359_02045) | - | 399930..400184 (+) | 255 | WP_061785674.1 | hypothetical protein | - |
| BC359_RS02035 (BC359_02050) | - | 400218..400640 (-) | 423 | WP_025908774.1 | helix-turn-helix transcriptional regulator | - |
| BC359_RS02040 (BC359_02055) | - | 401109..401576 (-) | 468 | WP_025908775.1 | YwpF family protein | - |
| BC359_RS02045 (BC359_02060) | ssbB | 401698..402042 (+) | 345 | WP_025908776.1 | single-stranded DNA-binding protein | Machinery gene |
| BC359_RS02050 (BC359_02065) | - | 402222..403277 (-) | 1056 | WP_025908777.1 | LysM peptidoglycan-binding domain-containing protein | - |
| BC359_RS02055 (BC359_02070) | - | 403442..406057 (-) | 2616 | WP_078989083.1 | DEAD/DEAH box helicase | - |
Sequence
Protein
Download Length: 114 a.a. Molecular weight: 13005.79 Da Isoelectric Point: 7.9924
>NTDB_id=192249 BC359_RS02045 WP_025908776.1 401698..402042(+) (ssbB) [Priestia flexa strain KLBMP 4941]
MINEVVLVGRLTRVPELKYTSEGIPFSHITVAVNRNFRNQEGEVEADFVSITLWRKNAENMTKYCDKGSIIGVVGRVQTR
TFENNLQQRVYVTDIIAEYVRFLSGKPSSPENQP
MINEVVLVGRLTRVPELKYTSEGIPFSHITVAVNRNFRNQEGEVEADFVSITLWRKNAENMTKYCDKGSIIGVVGRVQTR
TFENNLQQRVYVTDIIAEYVRFLSGKPSSPENQP
Nucleotide
Download Length: 345 bp
>NTDB_id=192249 BC359_RS02045 WP_025908776.1 401698..402042(+) (ssbB) [Priestia flexa strain KLBMP 4941]
TTGATTAATGAAGTAGTGCTAGTAGGGCGTTTGACACGAGTTCCTGAACTGAAATATACATCCGAAGGAATTCCTTTTTC
CCATATTACAGTAGCTGTGAACAGAAACTTTCGTAACCAGGAAGGAGAAGTGGAAGCTGATTTTGTATCAATTACGTTAT
GGAGAAAAAATGCTGAAAACATGACGAAATACTGCGATAAGGGATCGATTATAGGAGTCGTAGGACGTGTGCAAACGCGT
ACGTTTGAAAACAATTTGCAGCAGCGTGTTTATGTGACAGATATTATCGCAGAATACGTTCGGTTTTTAAGCGGTAAGCC
TTCCTCACCTGAAAATCAGCCATGA
TTGATTAATGAAGTAGTGCTAGTAGGGCGTTTGACACGAGTTCCTGAACTGAAATATACATCCGAAGGAATTCCTTTTTC
CCATATTACAGTAGCTGTGAACAGAAACTTTCGTAACCAGGAAGGAGAAGTGGAAGCTGATTTTGTATCAATTACGTTAT
GGAGAAAAAATGCTGAAAACATGACGAAATACTGCGATAAGGGATCGATTATAGGAGTCGTAGGACGTGTGCAAACGCGT
ACGTTTGAAAACAATTTGCAGCAGCGTGTTTATGTGACAGATATTATCGCAGAATACGTTCGGTTTTTAAGCGGTAAGCC
TTCCTCACCTGAAAATCAGCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
57.009 |
93.86 |
0.535 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.717 |
92.982 |
0.509 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
47.788 |
99.123 |
0.474 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
42.991 |
93.86 |
0.404 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
42.991 |
93.86 |
0.404 |
| ssbB/cilA | Streptococcus mitis SK321 |
42.056 |
93.86 |
0.395 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
42.056 |
93.86 |
0.395 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
42.056 |
93.86 |
0.395 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
42.056 |
93.86 |
0.395 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.056 |
93.86 |
0.395 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
43.75 |
84.211 |
0.368 |