Detailed information NTG0188638

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: BBP08_RS08110
• Genome accession: NZ_CP016501
• Coordinates: 1602419..1602814 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282451.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain WC1535
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1597419..1607814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BBP08_RS08085 (BBP08_07805)	lrgB	1597803..1598531 (-)	729	WP_000421726.1	antiholin-like protein LrgB	-
BBP08_RS08090 (BBP08_07810)	-	1598533..1598988 (-)	456	WP_000683316.1	CidA/LrgA family protein	-
BBP08_RS08095 (BBP08_07815)	-	1599158..1599898 (-)	741	WP_000697630.1	LytTR family DNA-binding domain-containing protein	-
BBP08_RS08100 (BBP08_07820)	-	1599879..1601624 (-)	1746	WP_000930334.1	LytS/YhcK type 5TM receptor domain-containing protein	-
BBP08_RS08105 (BBP08_07825)	-	1601651..1602295 (-)	645	WP_000416612.1	HAD family phosphatase	-
BBP08_RS08110 (BBP08_07830)	ssbA	1602419..1602814 (-)	396	WP_000282451.1	single-stranded DNA-binding protein	Machinery gene
BBP08_RS08115 (BBP08_07835)	-	1602895..1603611 (+)	717	WP_000186185.1	class I SAM-dependent methyltransferase	-
BBP08_RS08120 (BBP08_07840)	ytpR	1603665..1604291 (-)	627	WP_000578328.1	YtpR family tRNA-binding protein	-
BBP08_RS08125 (BBP08_07845)	-	1604324..1604647 (-)	324	WP_000602781.1	thioredoxin family protein	-
BBP08_RS08130 (BBP08_07850)	-	1604644..1604928 (-)	285	WP_000791272.1	DUF4651 domain-containing protein	-
BBP08_RS08135 (BBP08_07855)	-	1605089..1605328 (+)	240	WP_000660180.1	hypothetical protein	-
BBP08_RS08140 (BBP08_07860)	pepA	1605513..1606580 (+)	1068	WP_001281323.1	glutamyl aminopeptidase	-
BBP08_RS08145 (BBP08_07865)	proC	1606650..1607420 (+)	771	WP_001865901.1	pyrroline-5-carboxylate reductase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14761.80 Da
• Isoelectric Point: 7.0189

>NTDB_id=188638 BBP08_RS08110 WP_000282451.1 1602419..1602814(-) (ssbA) [Streptococcus agalactiae strain WC1535]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFITVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=188638 BBP08_RS08110 WP_000282451.1 1602419..1602814(-) (ssbA) [Streptococcus agalactiae strain WC1535]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTGAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTACTGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.153	100	0.802
ssbB/cilA	Streptococcus pneumoniae R6	77.099	100	0.771
ssbB/cilA	Streptococcus pneumoniae Rx1	77.099	100	0.771
ssbB/cilA	Streptococcus pneumoniae D39	77.099	100	0.771
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.763
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.763
ssbB/cilA	Streptococcus mitis NCTC 12261	75.573	100	0.756
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.756
ssbB	Lactococcus lactis subsp. cremoris KW2	60.526	87.023	0.527
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405
ssb	Latilactobacillus sakei subsp. sakei 23K	45.133	86.26	0.389