Detailed information    

insolico Bioinformatically predicted

Overview

Name   cinA   Type   Machinery gene
Locus tag   A9C19_RS10945 Genome accession   NZ_CP016020
Coordinates   2267792..2269033 (-) Length   413 a.a.
NCBI ID   WP_099092808.1    Uniprot ID   -
Organism   Bacillus weihaiensis strain Alg07     
Function   unknown (predicted from homology)   
Unclear

Genomic Context

Location: 2262792..2274033
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A9C19_RS10930 (A9C19_10715) - 2263437..2264231 (-) 795 WP_072579975.1 TIGR00282 family metallophosphoesterase -
  A9C19_RS10935 (A9C19_10720) rny 2264390..2265952 (-) 1563 WP_072579976.1 ribonuclease Y -
  A9C19_RS10940 (A9C19_10725) recA 2266496..2267533 (-) 1038 WP_072579977.1 recombinase RecA Machinery gene
  A9C19_RS10945 (A9C19_10730) cinA 2267792..2269033 (-) 1242 WP_099092808.1 competence/damage-inducible protein A Machinery gene
  A9C19_RS10950 (A9C19_10735) pgsA 2269061..2269639 (-) 579 WP_072579979.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  A9C19_RS10955 (A9C19_10740) - 2269753..2270616 (-) 864 WP_072579980.1 helix-turn-helix domain-containing protein -
  A9C19_RS10960 (A9C19_10745) - 2270635..2271426 (-) 792 WP_072579981.1 DUF3388 domain-containing protein -
  A9C19_RS10965 (A9C19_10750) - 2271584..2271841 (-) 258 WP_072579982.1 DUF3243 domain-containing protein -
  A9C19_RS10970 (A9C19_10755) ymfI 2271927..2272652 (-) 726 WP_072579983.1 elongation factor P 5-aminopentanone reductase -

Sequence

Protein


Download         Length: 413 a.a.        Molecular weight: 45506.96 Da        Isoelectric Point: 6.5051

>NTDB_id=185314 A9C19_RS10945 WP_099092808.1 2267792..2269033(-) (cinA) [Bacillus weihaiensis strain Alg07]
MRTEIIAVGSELLLGQIVNSNAQFLSQQLAEIGLNVYYHTVVGDNQNRLKHAIETAQKRSNVIIFTGGLGPTKDDLTKET
IAHHLGKSLVIDQDALTNIEQYYLQTKRSMSENNKKQAIVIEGSIVLKNDYGMAPGMAIDVDETIYMLLPGPPSEMKPMF
TQYGRTYFYEKLGFQEHLTSRVLRYFGIGESQLETDIQDLIDLQTNPTIAPLAADGEVTLRLTAKHKSEEAAIRLIDELE
TKINERVGQFFYGYEQTTLFQKVKELLLAKNKTISAAESLTGGLFSQHLTSLEAASQFVKGGIVCYTNEVKKNLLGVSPL
ILDDDGAVSEKCASEMASQIRLKTNSDIGISFTGVAGPGKQEGKPVGTVFIGISTNNSTNVYPLHLAGSRHGIRNRTVKY
GCHYLVKLLQGIE

Nucleotide


Download         Length: 1242 bp        

>NTDB_id=185314 A9C19_RS10945 WP_099092808.1 2267792..2269033(-) (cinA) [Bacillus weihaiensis strain Alg07]
ATTCGTACAGAAATTATTGCAGTGGGATCTGAGCTTTTATTAGGACAAATTGTCAATAGTAATGCGCAGTTTTTGTCTCA
GCAGTTAGCAGAGATAGGTTTAAATGTTTATTATCATACAGTGGTAGGAGACAACCAAAATCGCTTAAAGCATGCAATTG
AGACTGCACAGAAGCGATCTAATGTCATTATTTTCACTGGAGGATTAGGTCCAACTAAAGATGACCTAACGAAAGAAACA
ATTGCACATCATCTTGGGAAATCTCTTGTTATTGATCAGGATGCTTTAACTAATATTGAACAATACTATCTACAAACGAA
ACGTTCCATGTCCGAAAATAATAAGAAGCAGGCTATAGTTATTGAAGGATCCATCGTCTTAAAGAACGATTATGGGATGG
CACCTGGGATGGCGATTGACGTAGATGAAACAATCTATATGTTGTTGCCTGGTCCTCCTAGTGAAATGAAACCTATGTTT
ACACAATATGGTAGAACTTATTTTTATGAGAAATTGGGGTTTCAAGAACATCTTACTTCAAGAGTTTTGCGCTACTTTGG
GATTGGAGAGTCTCAGCTTGAGACAGATATTCAGGACCTAATTGATCTTCAAACGAACCCAACTATTGCACCCCTTGCAG
CTGATGGTGAGGTTACTCTCAGACTTACAGCTAAGCATAAGTCAGAAGAAGCTGCAATCCGCCTTATAGACGAGCTTGAA
ACCAAAATTAATGAGAGAGTAGGACAGTTTTTTTATGGCTATGAACAAACTACTCTCTTCCAAAAGGTAAAAGAACTTCT
ATTGGCTAAAAATAAAACAATTTCAGCTGCTGAAAGTTTGACTGGAGGTTTGTTTTCTCAGCATTTAACAAGTTTAGAGG
CTGCATCACAATTCGTGAAAGGCGGCATTGTGTGTTACACAAATGAAGTGAAAAAAAACCTGTTAGGTGTTTCCCCTTTA
ATTCTTGATGATGATGGTGCAGTTAGCGAGAAGTGTGCAAGTGAAATGGCTAGTCAAATTCGCTTAAAAACAAATAGTGA
CATAGGGATTAGCTTTACAGGAGTTGCAGGACCTGGTAAGCAAGAAGGAAAGCCTGTTGGAACTGTCTTTATTGGTATTT
CAACTAATAATAGTACAAATGTATATCCACTCCATCTAGCTGGCTCTAGACATGGAATTCGCAATAGAACCGTAAAGTAC
GGTTGTCACTATTTGGTCAAACTATTACAAGGGATAGAATGA

Domains

Predicted by InterproScan.

Damage-inducible protein CinA KH domain (CinA_KH)

(180-253)

Competence-damaged protein (CinA)

(258-408)

Probable molybdopterin binding domain (MoCF_biosynth)

(5-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cinA Bacillus subtilis subsp. subtilis str. 168

62.136

99.758

0.62
  cinA Streptococcus pneumoniae TIGR4

47.971

100

0.487
  cinA Streptococcus mitis NCTC 12261

47.733

100

0.484
  cinA Streptococcus mitis SK321

47.733

100

0.484
  cinA Streptococcus pneumoniae Rx1

47.494

100

0.482
  cinA Streptococcus pneumoniae R6

47.494

100

0.482
  cinA Streptococcus pneumoniae D39

47.255

100

0.479
  cinA Streptococcus mutans UA159

47.25

96.852

0.458
  cinA Streptococcus suis isolate S10

39.32

99.758

0.392

Multiple sequence alignment