Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | NX99_RS07670 | Genome accession | NZ_CP015282 |
| Coordinates | 1667629..1668021 (+) | Length | 130 a.a. |
| NCBI ID | WP_002885697.1 | Uniprot ID | A0AB33ZFB8 |
| Organism | Streptococcus salivarius strain ATCC 27945 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1662629..1673021
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NX99_RS07640 (NX99_07500) | pepA | 1663310..1664377 (-) | 1068 | WP_084915251.1 | glutamyl aminopeptidase | - |
| NX99_RS07645 (NX99_07505) | - | 1664477..1664761 (+) | 285 | WP_003091918.1 | DUF4651 domain-containing protein | - |
| NX99_RS07650 (NX99_07510) | - | 1664758..1665072 (+) | 315 | WP_084915253.1 | thioredoxin family protein | - |
| NX99_RS07655 (NX99_07515) | - | 1665076..1665600 (+) | 525 | WP_002885713.1 | hypothetical protein | - |
| NX99_RS07660 (NX99_07520) | ytpR | 1665632..1666255 (+) | 624 | WP_002885779.1 | YtpR family tRNA-binding protein | - |
| NX99_RS07665 (NX99_07525) | - | 1666523..1667197 (+) | 675 | WP_084915255.1 | CPBP family intramembrane glutamic endopeptidase | - |
| NX99_RS07670 (NX99_07530) | ssbA | 1667629..1668021 (+) | 393 | WP_002885697.1 | single-stranded DNA-binding protein | Machinery gene |
| NX99_RS07675 (NX99_07535) | tadA | 1668781..1669299 (+) | 519 | WP_049553956.1 | tRNA adenosine(34) deaminase TadA | - |
| NX99_RS07680 (NX99_07540) | - | 1669384..1669638 (-) | 255 | WP_038676855.1 | hypothetical protein | - |
| NX99_RS07685 (NX99_07545) | - | 1669686..1669853 (-) | 168 | WP_002885883.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| NX99_RS07690 (NX99_07550) | - | 1669873..1670031 (-) | 159 | WP_002885650.1 | class IIb bacteriocin, lactobin A/cerein 7B family | - |
| NX99_RS07700 (NX99_07560) | - | 1670453..1671292 (+) | 840 | WP_048674205.1 | methyltransferase domain-containing protein | - |
| NX99_RS07705 (NX99_07565) | - | 1671405..1672157 (+) | 753 | WP_048674203.1 | HAD family hydrolase | - |
| NX99_RS07710 (NX99_07570) | dapD | 1672243..1672941 (+) | 699 | WP_048674201.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | - |
Sequence
Protein
Download Length: 130 a.a. Molecular weight: 14759.67 Da Isoelectric Point: 5.9275
>NTDB_id=178240 NX99_RS07670 WP_002885697.1 1667629..1668021(+) (ssbA) [Streptococcus salivarius strain ATCC 27945]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF
Nucleotide
Download Length: 393 bp
>NTDB_id=178240 NX99_RS07670 WP_002885697.1 1667629..1668021(+) (ssbA) [Streptococcus salivarius strain ATCC 27945]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACTCGT
AAGTACGATAAGGATGGTCAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACTCGT
AAGTACGATAAGGATGGTCAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.916 |
100 |
0.815 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
76.336 |
100 |
0.769 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
76.336 |
100 |
0.769 |
| ssbB/cilA | Streptococcus mitis SK321 |
75.573 |
100 |
0.762 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
75.573 |
100 |
0.762 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
75.573 |
100 |
0.762 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
75.573 |
100 |
0.762 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
74.046 |
100 |
0.746 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
61.607 |
86.154 |
0.531 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
48.113 |
81.538 |
0.392 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
47.17 |
81.538 |
0.385 |