Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | AZE34_RS11175 | Genome accession | NZ_CP014567 |
| Coordinates | 2244804..2245115 (+) | Length | 103 a.a. |
| NCBI ID | WP_017176238.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain C34847 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2239804..2250115
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZE34_RS11145 (AZE34_10905) | - | 2240586..2240789 (+) | 204 | WP_265475246.1 | YqgQ family protein | - |
| AZE34_RS11150 (AZE34_10910) | - | 2240786..2241772 (+) | 987 | WP_002449785.1 | ROK family glucokinase | - |
| AZE34_RS11155 (AZE34_10915) | - | 2241772..2242095 (+) | 324 | WP_017176234.1 | MTH1187 family thiamine-binding protein | - |
| AZE34_RS11160 (AZE34_10920) | - | 2242097..2242723 (+) | 627 | WP_017176235.1 | MBL fold metallo-hydrolase | - |
| AZE34_RS11165 (AZE34_10925) | comGA | 2242774..2243748 (+) | 975 | WP_017176236.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AZE34_RS11170 (AZE34_10930) | comGB | 2243726..2244784 (+) | 1059 | WP_048681721.1 | competence type IV pilus assembly protein ComGB | - |
| AZE34_RS11175 (AZE34_10935) | comGC | 2244804..2245115 (+) | 312 | WP_017176238.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AZE34_RS11180 (AZE34_10940) | comGD | 2245105..2245539 (+) | 435 | WP_017176239.1 | competence type IV pilus minor pilin ComGD | - |
| AZE34_RS11185 (AZE34_10945) | - | 2245731..2246228 (+) | 498 | WP_017176240.1 | competence protein ComG | - |
| AZE34_RS11190 (AZE34_10955) | - | 2246393..2246902 (+) | 510 | WP_017176242.1 | shikimate kinase | - |
| AZE34_RS11195 (AZE34_10960) | gcvT | 2247097..2248188 (+) | 1092 | WP_017176243.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| AZE34_RS11200 (AZE34_10965) | gcvPA | 2248205..2249557 (+) | 1353 | WP_017176244.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11400.52 Da Isoelectric Point: 9.1831
>NTDB_id=172530 AZE34_RS11175 WP_017176238.1 2244804..2245115(+) (comGC) [Staphylococcus hominis strain C34847]
MKKFKNKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMSHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLVTEGFI
KQGQSSCKSGETISIKNGEAVAE
MKKFKNKLKAFTLIEMLLVLLIISVLLILIIPNIAKQMSHIQSTGCEAQVKMVNSQIEAYTLKHNRVPNSIEDLVTEGFI
KQGQSSCKSGETISIKNGEAVAE
Nucleotide
Download Length: 312 bp
>NTDB_id=172530 AZE34_RS11175 WP_017176238.1 2244804..2245115(+) (comGC) [Staphylococcus hominis strain C34847]
ATGAAAAAATTCAAAAATAAATTAAAAGCTTTTACTTTAATTGAGATGTTACTTGTACTATTAATAATTAGTGTTTTACT
CATTCTTATTATTCCGAATATAGCTAAACAAATGTCACATATTCAATCAACAGGATGTGAAGCACAAGTGAAAATGGTCA
ATAGTCAAATTGAAGCTTATACTTTAAAACATAATAGAGTTCCTAATTCTATTGAGGACTTAGTAACTGAAGGGTTTATA
AAACAAGGGCAATCATCTTGTAAGTCTGGAGAAACTATCAGTATTAAAAATGGAGAAGCAGTTGCAGAGTAA
ATGAAAAAATTCAAAAATAAATTAAAAGCTTTTACTTTAATTGAGATGTTACTTGTACTATTAATAATTAGTGTTTTACT
CATTCTTATTATTCCGAATATAGCTAAACAAATGTCACATATTCAATCAACAGGATGTGAAGCACAAGTGAAAATGGTCA
ATAGTCAAATTGAAGCTTATACTTTAAAACATAATAGAGTTCCTAATTCTATTGAGGACTTAGTAACTGAAGGGTTTATA
AAACAAGGGCAATCATCTTGTAAGTCTGGAGAAACTATCAGTATTAAAAATGGAGAAGCAGTTGCAGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
79.412 |
99.029 |
0.786 |
| comGC | Staphylococcus aureus MW2 |
79.412 |
99.029 |
0.786 |
| comGC/cglC | Streptococcus mitis SK321 |
46.875 |
93.204 |
0.437 |
| comGC/cglC | Streptococcus pneumoniae D39 |
45.833 |
93.204 |
0.427 |
| comGC/cglC | Streptococcus pneumoniae R6 |
45.833 |
93.204 |
0.427 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
45.833 |
93.204 |
0.427 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
45.833 |
93.204 |
0.427 |
| comYC | Streptococcus mutans UA140 |
48.315 |
86.408 |
0.417 |
| comYC | Streptococcus mutans UA159 |
48.315 |
86.408 |
0.417 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
44.211 |
92.233 |
0.408 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
47.727 |
85.437 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
46.512 |
83.495 |
0.388 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
48.193 |
80.583 |
0.388 |