Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AZE34_RS11165 | Genome accession | NZ_CP014567 |
| Coordinates | 2242774..2243748 (+) | Length | 324 a.a. |
| NCBI ID | WP_017176236.1 | Uniprot ID | - |
| Organism | Staphylococcus hominis strain C34847 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2237774..2248748
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AZE34_RS11130 (AZE34_10890) | rpmG | 2238234..2238383 (+) | 150 | WP_002449881.1 | 50S ribosomal protein L33 | - |
| AZE34_RS11135 (AZE34_10895) | - | 2238594..2239145 (+) | 552 | WP_017176231.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| AZE34_RS11140 (AZE34_10900) | - | 2239145..2240602 (+) | 1458 | WP_017176232.1 | rhomboid family protein | - |
| AZE34_RS11145 (AZE34_10905) | - | 2240586..2240789 (+) | 204 | WP_265475246.1 | YqgQ family protein | - |
| AZE34_RS11150 (AZE34_10910) | - | 2240786..2241772 (+) | 987 | WP_002449785.1 | ROK family glucokinase | - |
| AZE34_RS11155 (AZE34_10915) | - | 2241772..2242095 (+) | 324 | WP_017176234.1 | MTH1187 family thiamine-binding protein | - |
| AZE34_RS11160 (AZE34_10920) | - | 2242097..2242723 (+) | 627 | WP_017176235.1 | MBL fold metallo-hydrolase | - |
| AZE34_RS11165 (AZE34_10925) | comGA | 2242774..2243748 (+) | 975 | WP_017176236.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| AZE34_RS11170 (AZE34_10930) | comGB | 2243726..2244784 (+) | 1059 | WP_048681721.1 | competence type IV pilus assembly protein ComGB | - |
| AZE34_RS11175 (AZE34_10935) | comGC | 2244804..2245115 (+) | 312 | WP_017176238.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AZE34_RS11180 (AZE34_10940) | comGD | 2245105..2245539 (+) | 435 | WP_017176239.1 | competence type IV pilus minor pilin ComGD | - |
| AZE34_RS11185 (AZE34_10945) | - | 2245731..2246228 (+) | 498 | WP_017176240.1 | competence protein ComG | - |
| AZE34_RS11190 (AZE34_10955) | - | 2246393..2246902 (+) | 510 | WP_017176242.1 | shikimate kinase | - |
| AZE34_RS11195 (AZE34_10960) | gcvT | 2247097..2248188 (+) | 1092 | WP_017176243.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36866.84 Da Isoelectric Point: 8.4444
>NTDB_id=172529 AZE34_RS11165 WP_017176236.1 2242774..2243748(+) (comGA) [Staphylococcus hominis strain C34847]
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDILETYEMFSNDIYEKLLIYMKFKANLDVSTHQIAQSGRYTYHA
KSIFYLRISTLPLSLGVESCVIRLIPQYFTSKREYKDFNDFKSLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVSSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTSNQRKLVCESITNNQIQYFFEHNHTLPKTFNNLKEKLLSLSKEGLICEDVV
EKYI
MKLLFQEIINKAISKNASDVHFIPSEDKVHIKFRVNDILETYEMFSNDIYEKLLIYMKFKANLDVSTHQIAQSGRYTYHA
KSIFYLRISTLPLSLGVESCVIRLIPQYFTSKREYKDFNDFKSLMNKKQGLILLTGPTGSGKSTLMYQLVLYAFQELNLN
VITIENPVEQLLKGITQVSVNHKAGIDYVSSFKAILRCDPDVILIGEIRDAEVAKCVIQASLSGHLVLTTMHSSNCKGAI
LRLLEMGISVQEISQAINVISNQRLVTTTSNQRKLVCESITNNQIQYFFEHNHTLPKTFNNLKEKLLSLSKEGLICEDVV
EKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=172529 AZE34_RS11165 WP_017176236.1 2242774..2243748(+) (comGA) [Staphylococcus hominis strain C34847]
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATATATTAGAGACATATGAAATGTTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAATAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAGTAGAAAGTTGTGTTATTAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAGGACTTTAATGACTTTAAATCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATTGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCCGGTATAGA
TTATGTTAGTTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGTTAACTACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTTATTTCAAATCAAAGATTAGTTAC
AACTACTTCAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTAAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
TTGAAATTATTATTTCAAGAAATAATTAATAAAGCAATTTCAAAAAATGCAAGTGACGTACACTTTATTCCTTCAGAGGA
TAAAGTACATATTAAATTCAGAGTGAATGATATATTAGAGACATATGAAATGTTTAGTAATGACATTTATGAAAAATTAT
TAATTTATATGAAATTTAAAGCAAATTTAGATGTATCAACACATCAAATAGCTCAAAGTGGTAGATATACTTATCATGCT
AAATCAATATTTTATTTAAGAATTTCTACTTTACCTTTGTCATTAGGAGTAGAAAGTTGTGTTATTAGACTTATCCCTCA
ATATTTCACTTCTAAAAGAGAGTATAAGGACTTTAATGACTTTAAATCTCTAATGAATAAAAAGCAAGGTCTCATTTTAC
TTACTGGTCCAACAGGTTCAGGTAAAAGTACTTTGATGTATCAATTAGTACTCTATGCTTTTCAAGAATTAAATTTAAAT
GTTATTACAATTGAAAATCCTGTTGAACAATTATTAAAAGGCATAACACAAGTGTCAGTAAATCATAAAGCCGGTATAGA
TTATGTTAGTTCATTTAAAGCAATATTAAGATGTGATCCAGATGTTATTTTAATTGGTGAAATTAGAGATGCTGAAGTGG
CAAAATGTGTTATTCAAGCAAGTTTAAGTGGTCATTTAGTGTTAACTACTATGCATTCAAGCAATTGTAAGGGCGCAATA
CTCAGATTGTTAGAGATGGGGATTAGTGTTCAAGAAATTTCACAAGCAATAAATGTTATTTCAAATCAAAGATTAGTTAC
AACTACTTCAAATCAAAGAAAGCTTGTTTGTGAGTCTATTACAAATAATCAAATTCAATATTTTTTTGAACATAACCATA
CGCTTCCTAAGACATTTAATAATTTAAAAGAAAAATTGTTATCGCTATCGAAAGAAGGTCTTATATGTGAAGATGTGGTT
GAAAAATATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
69.136 |
100 |
0.691 |
| comGA | Staphylococcus aureus N315 |
69.136 |
100 |
0.691 |