Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AUP74_RS16660 | Genome accession | NZ_CP014143 |
| Coordinates | 3804263..3804799 (-) | Length | 178 a.a. |
| NCBI ID | WP_069948983.1 | Uniprot ID | A0A1C9WC64 |
| Organism | Microbulbifer aggregans strain CCB-MM1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3799263..3809799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUP74_RS16650 (AUP74_03352) | pilE | 3802426..3802962 (-) | 537 | WP_269465979.1 | pilin | Machinery gene |
| AUP74_RS16655 (AUP74_03353) | tfpZ | 3803445..3804245 (-) | 801 | WP_158514578.1 | TfpX/TfpZ family type IV pilin accessory protein | - |
| AUP74_RS16660 (AUP74_03354) | pilE | 3804263..3804799 (-) | 537 | WP_069948983.1 | pilin | Machinery gene |
| AUP74_RS16665 (AUP74_03355) | pilB | 3805352..3807064 (+) | 1713 | WP_069948547.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| AUP74_RS16670 (AUP74_03356) | pilC | 3807173..3808384 (+) | 1212 | WP_069948548.1 | type II secretion system F family protein | Machinery gene |
| AUP74_RS16675 (AUP74_03357) | - | 3808398..3809282 (+) | 885 | WP_069948549.1 | prepilin peptidase | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 18009.59 Da Isoelectric Point: 5.0486
>NTDB_id=168705 AUP74_RS16660 WP_069948983.1 3804263..3804799(-) (pilE) [Microbulbifer aggregans strain CCB-MM1]
MKKQQGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVSEAVIAASSAKSVMSEAFQSGGIGGMTAAATGYNATPITQK
ASKYVQDVVVTAASPWDIKVQIEANANNGIPATLDGNTLVFTPNVDDGAGAIGAPVATSVGAIDWACASLTNATATARGF
GSIVAGTLPAKYAPSECR
MKKQQGFTLIELMIVVAIIGILAAVALPAYQDYTVRAKVSEAVIAASSAKSVMSEAFQSGGIGGMTAAATGYNATPITQK
ASKYVQDVVVTAASPWDIKVQIEANANNGIPATLDGNTLVFTPNVDDGAGAIGAPVATSVGAIDWACASLTNATATARGF
GSIVAGTLPAKYAPSECR
Nucleotide
Download Length: 537 bp
>NTDB_id=168705 AUP74_RS16660 WP_069948983.1 3804263..3804799(-) (pilE) [Microbulbifer aggregans strain CCB-MM1]
ATGAAAAAACAACAGGGTTTTACTCTTATTGAATTGATGATCGTGGTTGCGATCATCGGCATTCTGGCTGCGGTGGCGCT
GCCGGCCTACCAGGATTACACCGTGCGTGCCAAGGTGAGTGAAGCGGTAATCGCTGCCTCGTCCGCCAAGTCGGTAATGA
GTGAGGCTTTCCAGAGCGGTGGTATCGGTGGCATGACCGCTGCGGCTACCGGCTATAACGCCACTCCGATAACTCAAAAG
GCGTCTAAGTACGTTCAGGATGTGGTCGTAACAGCGGCCTCTCCATGGGATATCAAAGTCCAAATCGAGGCGAACGCTAA
CAACGGTATCCCGGCGACTCTCGATGGAAATACGCTGGTATTCACCCCTAACGTTGACGACGGAGCTGGGGCAATTGGTG
CGCCAGTAGCTACTTCTGTAGGTGCCATTGACTGGGCTTGCGCTTCCCTCACCAATGCGACTGCAACTGCACGCGGCTTT
GGTAGCATTGTTGCTGGTACCCTGCCGGCTAAATATGCACCGTCCGAGTGCCGCTAA
ATGAAAAAACAACAGGGTTTTACTCTTATTGAATTGATGATCGTGGTTGCGATCATCGGCATTCTGGCTGCGGTGGCGCT
GCCGGCCTACCAGGATTACACCGTGCGTGCCAAGGTGAGTGAAGCGGTAATCGCTGCCTCGTCCGCCAAGTCGGTAATGA
GTGAGGCTTTCCAGAGCGGTGGTATCGGTGGCATGACCGCTGCGGCTACCGGCTATAACGCCACTCCGATAACTCAAAAG
GCGTCTAAGTACGTTCAGGATGTGGTCGTAACAGCGGCCTCTCCATGGGATATCAAAGTCCAAATCGAGGCGAACGCTAA
CAACGGTATCCCGGCGACTCTCGATGGAAATACGCTGGTATTCACCCCTAACGTTGACGACGGAGCTGGGGCAATTGGTG
CGCCAGTAGCTACTTCTGTAGGTGCCATTGACTGGGCTTGCGCTTCCCTCACCAATGCGACTGCAACTGCACGCGGCTTT
GGTAGCATTGTTGCTGGTACCCTGCCGGCTAAATATGCACCGTCCGAGTGCCGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
63.492 |
100 |
0.674 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.779 |
100 |
0.404 |
| pilA2 | Legionella pneumophila str. Paris |
40.449 |
100 |
0.404 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
40.113 |
99.438 |
0.399 |
| comP | Acinetobacter baylyi ADP1 |
36.957 |
100 |
0.382 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
37.778 |
100 |
0.382 |