Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AUP74_RS16650 | Genome accession | NZ_CP014143 |
| Coordinates | 3802426..3802962 (-) | Length | 178 a.a. |
| NCBI ID | WP_269465979.1 | Uniprot ID | - |
| Organism | Microbulbifer aggregans strain CCB-MM1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3797426..3807962
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUP74_RS16640 (AUP74_03350) | - | 3797539..3799050 (+) | 1512 | WP_069948544.1 | Y-family DNA polymerase | - |
| AUP74_RS16645 (AUP74_03351) | - | 3799112..3802279 (+) | 3168 | WP_069948545.1 | error-prone DNA polymerase | - |
| AUP74_RS16650 (AUP74_03352) | pilE | 3802426..3802962 (-) | 537 | WP_269465979.1 | pilin | Machinery gene |
| AUP74_RS16655 (AUP74_03353) | tfpZ | 3803445..3804245 (-) | 801 | WP_158514578.1 | TfpX/TfpZ family type IV pilin accessory protein | - |
| AUP74_RS16660 (AUP74_03354) | pilE | 3804263..3804799 (-) | 537 | WP_069948983.1 | pilin | Machinery gene |
| AUP74_RS16665 (AUP74_03355) | pilB | 3805352..3807064 (+) | 1713 | WP_069948547.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 18276.90 Da Isoelectric Point: 4.8549
>NTDB_id=168704 AUP74_RS16650 WP_269465979.1 3802426..3802962(-) (pilE) [Microbulbifer aggregans strain CCB-MM1]
MEAGEMARMHGFTLIELMIVVAIIGILAAVALPAYRDYAVRAKVSEGVVAASAVKSLLSEGYESGGVTGMTAAAAGHNAV
PITQKQSKYVKNVVITEGAPWDVQIQIEANASNGIPTGLDGQTVVFTPNVALNEPTQASVGGIDWACASATNVTATDRGF
GSVVAGTLPAKYAPLECR
MEAGEMARMHGFTLIELMIVVAIIGILAAVALPAYRDYAVRAKVSEGVVAASAVKSLLSEGYESGGVTGMTAAAAGHNAV
PITQKQSKYVKNVVITEGAPWDVQIQIEANASNGIPTGLDGQTVVFTPNVALNEPTQASVGGIDWACASATNVTATDRGF
GSVVAGTLPAKYAPLECR
Nucleotide
Download Length: 537 bp
>NTDB_id=168704 AUP74_RS16650 WP_269465979.1 3802426..3802962(-) (pilE) [Microbulbifer aggregans strain CCB-MM1]
ATGGAGGCAGGTGAAATGGCTAGAATGCATGGATTTACTTTGATTGAGTTAATGATCGTAGTGGCAATTATTGGCATTCT
GGCTGCTGTTGCTTTACCCGCCTACAGGGATTATGCCGTGCGCGCTAAGGTGAGTGAGGGTGTGGTTGCTGCTTCAGCGG
TAAAGTCTCTATTGAGCGAGGGTTATGAGAGTGGCGGTGTTACCGGCATGACTGCTGCAGCGGCTGGCCACAATGCGGTT
CCTATAACGCAGAAGCAGTCCAAGTATGTAAAAAATGTGGTAATTACTGAAGGTGCGCCTTGGGATGTTCAGATTCAAAT
TGAAGCAAATGCCAGCAATGGTATCCCAACAGGCTTGGATGGTCAGACAGTGGTTTTTACTCCGAATGTGGCTTTAAACG
AACCGACGCAGGCTTCCGTAGGGGGGATTGATTGGGCATGTGCATCCGCGACTAATGTAACTGCAACTGATCGCGGCTTT
GGTAGTGTTGTTGCTGGCACTTTGCCGGCCAAATATGCGCCTTTAGAGTGTCGATAA
ATGGAGGCAGGTGAAATGGCTAGAATGCATGGATTTACTTTGATTGAGTTAATGATCGTAGTGGCAATTATTGGCATTCT
GGCTGCTGTTGCTTTACCCGCCTACAGGGATTATGCCGTGCGCGCTAAGGTGAGTGAGGGTGTGGTTGCTGCTTCAGCGG
TAAAGTCTCTATTGAGCGAGGGTTATGAGAGTGGCGGTGTTACCGGCATGACTGCTGCAGCGGCTGGCCACAATGCGGTT
CCTATAACGCAGAAGCAGTCCAAGTATGTAAAAAATGTGGTAATTACTGAAGGTGCGCCTTGGGATGTTCAGATTCAAAT
TGAAGCAAATGCCAGCAATGGTATCCCAACAGGCTTGGATGGTCAGACAGTGGTTTTTACTCCGAATGTGGCTTTAAACG
AACCGACGCAGGCTTCCGTAGGGGGGATTGATTGGGCATGTGCATCCGCGACTAATGTAACTGCAACTGATCGCGGCTTT
GGTAGTGTTGTTGCTGGCACTTTGCCGGCCAAATATGCGCCTTTAGAGTGTCGATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
55.615 |
100 |
0.584 |
| pilA2 | Legionella pneumophila str. Paris |
38.983 |
99.438 |
0.388 |
| comP | Acinetobacter baylyi ADP1 |
38.068 |
98.876 |
0.376 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
38.728 |
97.191 |
0.376 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
36.932 |
98.876 |
0.365 |