Detailed information
Bioinformatically predicted
Overview
| Name | treR | Type | Regulator |
| Locus tag | A4W87_RS03690 | Genome accession | NZ_CP017273 |
| Coordinates | 728307..729020 (-) | Length | 237 a.a. |
| NCBI ID | WP_016265311.1 | Uniprot ID | - |
| Organism | Latilactobacillus sakei strain TMW 1.1396 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 723307..734020
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A4W87_RS03675 (A4W87_03635) | - | 724124..724990 (+) | 867 | WP_056948755.1 | GRP family sugar transporter | - |
| A4W87_RS03680 (A4W87_03640) | - | 725156..727702 (+) | 2547 | WP_076632372.1 | YfhO family protein | - |
| A4W87_RS03685 (A4W87_03645) | - | 727807..728244 (+) | 438 | WP_056948751.1 | hypothetical protein | - |
| A4W87_RS03690 (A4W87_03650) | treR | 728307..729020 (-) | 714 | WP_016265311.1 | trehalose operon repressor | Regulator |
| A4W87_RS03695 (A4W87_03655) | - | 729193..730671 (+) | 1479 | WP_076632371.1 | PTS transporter subunit EIIC | - |
| A4W87_RS03700 (A4W87_03660) | - | 730685..732334 (+) | 1650 | WP_011374897.1 | alpha,alpha-phosphotrehalase | - |
| A4W87_RS03705 (A4W87_03665) | - | 732348..732839 (+) | 492 | WP_016265308.1 | PTS glucose transporter subunit IIA | - |
| A4W87_RS03710 (A4W87_03670) | - | 732848..733648 (+) | 801 | WP_011374895.1 | ChbG/HpnK family deacetylase | - |
Sequence
Protein
Download Length: 237 a.a. Molecular weight: 26798.60 Da Isoelectric Point: 6.5879
>NTDB_id=167705 A4W87_RS03690 WP_016265311.1 728307..729020(-) (treR) [Latilactobacillus sakei strain TMW 1.1396]
MSKKYEIIYRELVHKITNHVYPANSFLPSENELATAYGTSRETVRKALASLLENGFIHKIKGKGSLVLDFDKYAFPISGL
TSYRELDSLFEMHTQTTVLQLQKATVPQAPFHLDPTEILPATYIQRLRTVDGEPIVIDNDYVLTSVVPEISRAVAQDSLY
HYFEQELGLTIGYGNKEFTVIPATEEQCAILKLAPNSAVVSVKGITHLQDNTLIQFTESIHRADKFKFIEHARRQSI
MSKKYEIIYRELVHKITNHVYPANSFLPSENELATAYGTSRETVRKALASLLENGFIHKIKGKGSLVLDFDKYAFPISGL
TSYRELDSLFEMHTQTTVLQLQKATVPQAPFHLDPTEILPATYIQRLRTVDGEPIVIDNDYVLTSVVPEISRAVAQDSLY
HYFEQELGLTIGYGNKEFTVIPATEEQCAILKLAPNSAVVSVKGITHLQDNTLIQFTESIHRADKFKFIEHARRQSI
Nucleotide
Download Length: 714 bp
>NTDB_id=167705 A4W87_RS03690 WP_016265311.1 728307..729020(-) (treR) [Latilactobacillus sakei strain TMW 1.1396]
ATGTCGAAAAAATATGAAATAATCTACCGCGAACTCGTCCATAAAATTACGAACCATGTTTATCCAGCCAACTCATTCTT
ACCCAGCGAAAACGAACTCGCAACAGCGTATGGTACCTCACGCGAAACAGTCCGCAAAGCACTCGCTAGCCTTTTAGAAA
ATGGCTTCATTCATAAGATCAAAGGCAAAGGCTCTTTAGTCCTTGATTTTGATAAATACGCCTTTCCCATTTCCGGCTTG
ACCAGTTACCGCGAATTGGATAGTCTCTTTGAAATGCACACGCAAACAACAGTCCTACAACTCCAAAAAGCAACCGTCCC
ACAAGCGCCTTTTCATTTAGACCCCACAGAGATTCTACCCGCGACCTATATTCAACGGTTACGGACCGTTGATGGTGAAC
CAATTGTTATCGATAACGACTACGTTCTAACCAGTGTTGTCCCAGAAATCTCACGGGCAGTCGCTCAGGATTCACTTTAT
CACTACTTTGAACAAGAATTGGGTCTAACTATTGGTTATGGGAATAAAGAATTCACTGTTATCCCTGCAACCGAAGAACA
GTGTGCCATTTTAAAACTCGCCCCTAATAGTGCGGTCGTTAGTGTTAAAGGTATCACTCATCTTCAGGATAATACCTTAA
TTCAATTTACCGAATCCATTCACCGGGCTGATAAATTTAAGTTTATTGAACACGCGCGCCGCCAATCAATTTAA
ATGTCGAAAAAATATGAAATAATCTACCGCGAACTCGTCCATAAAATTACGAACCATGTTTATCCAGCCAACTCATTCTT
ACCCAGCGAAAACGAACTCGCAACAGCGTATGGTACCTCACGCGAAACAGTCCGCAAAGCACTCGCTAGCCTTTTAGAAA
ATGGCTTCATTCATAAGATCAAAGGCAAAGGCTCTTTAGTCCTTGATTTTGATAAATACGCCTTTCCCATTTCCGGCTTG
ACCAGTTACCGCGAATTGGATAGTCTCTTTGAAATGCACACGCAAACAACAGTCCTACAACTCCAAAAAGCAACCGTCCC
ACAAGCGCCTTTTCATTTAGACCCCACAGAGATTCTACCCGCGACCTATATTCAACGGTTACGGACCGTTGATGGTGAAC
CAATTGTTATCGATAACGACTACGTTCTAACCAGTGTTGTCCCAGAAATCTCACGGGCAGTCGCTCAGGATTCACTTTAT
CACTACTTTGAACAAGAATTGGGTCTAACTATTGGTTATGGGAATAAAGAATTCACTGTTATCCCTGCAACCGAAGAACA
GTGTGCCATTTTAAAACTCGCCCCTAATAGTGCGGTCGTTAGTGTTAAAGGTATCACTCATCTTCAGGATAATACCTTAA
TTCAATTTACCGAATCCATTCACCGGGCTGATAAATTTAAGTTTATTGAACACGCGCGCCGCCAATCAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| treR | Streptococcus mutans UA159 |
37.339 |
98.312 |
0.367 |