Detailed information NTG0161023

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: APQ13_RS09120
• Genome accession: NZ_CP013237
• Coordinates: 1882355..1882849 (+)
• Length: 164 a.a.
• NCBI ID: WP_002261867.1
• Uniprot ID: A0AAX1K2T1
• Organism: Streptococcus mutans strain NG8 isolate Dental Plaque
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1877355..1887849

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APQ13_RS09095 (APQ13_09075)	-	1877718..1878767 (+)	1050	WP_002267521.1	zinc-dependent alcohol dehydrogenase family protein	-
APQ13_RS09100 (APQ13_09080)	mutY	1878955..1880100 (-)	1146	WP_002267522.1	A/G-specific adenine glycosylase	-
APQ13_RS09105 (APQ13_09085)	-	1881138..1881341 (-)	204	WP_002267523.1	hypothetical protein	-
APQ13_RS09110 (APQ13_09090)	-	1881646..1881891 (+)	246	WP_002263367.1	hypothetical protein	-
APQ13_RS09115 (APQ13_09095)	rpsF	1882047..1882337 (+)	291	WP_002261866.1	30S ribosomal protein S6	-
APQ13_RS09120 (APQ13_09100)	ssbA	1882355..1882849 (+)	495	WP_002261867.1	single-stranded DNA-binding protein	Machinery gene
APQ13_RS09125 (APQ13_09105)	rpsR	1882879..1883118 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
APQ13_RS09130 (APQ13_09110)	-	1883437..1884156 (+)	720	WP_002278468.1	TraX family protein	-
APQ13_RS09135 (APQ13_09115)	hdrM	1884164..1884850 (-)	687	WP_002268420.1	hdrR negative regulator HdrM	Regulator
APQ13_RS10230 (APQ13_09120)	hdrR	1884847..1885203 (-)	357	WP_002265268.1	LytTR family transcriptional regulator HdrR	Regulator
APQ13_RS09145 (APQ13_09125)	-	1885342..1886004 (-)	663	WP_002265267.1	DUF1129 domain-containing protein	-
APQ13_RS09150 (APQ13_09130)	-	1886287..1887231 (-)	945	WP_002262667.1	magnesium transporter CorA family protein	-

Sequence

Protein

• Length: 164 a.a.
• Molecular weight: 18331.97 Da
• Isoelectric Point: 4.7187

>NTDB_id=161023 APQ13_RS09120 WP_002261867.1 1882355..1882849(+) (ssbA) [Streptococcus mutans strain NG8 isolate Dental Plaque]
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINIVIWRQQAENLANWAKKGTLLGITGRIQTR
NYENQQGQRVYVTEVVADNFQILESRATREGQSNSYNAGGNNNFGGNNFSSQGSSQSQTPNFARDESPFGDSNPMDISDD
DLPF

Nucleotide

• Length: 495 bp

>NTDB_id=161023 APQ13_RS09120 WP_002261867.1 1882355..1882849(+) (ssbA) [Streptococcus mutans strain NG8 isolate Dental Plaque]
ATGATTAATAATGTAGTACTAGTTGGTCGCATGACTCGTGATGCTGAGCTCCGTTACACCCCAAGTAATCAAGCTGTGGC
AACTTTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTCATTAATATCGTGATTT
GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGGACTCTTTTAGGCATTACTGGTCGAATCCAGACCCGC
AATTATGAAAACCAACAAGGTCAGCGTGTTTACGTCACAGAAGTTGTTGCGGATAATTTCCAAATTTTGGAAAGTCGTGC
TACACGTGAAGGTCAATCAAACAGTTATAATGCTGGTGGTAACAATAACTTTGGCGGAAATAATTTTTCTTCCCAAGGTT
CTTCACAATCTCAAACGCCAAACTTTGCTAGAGATGAAAGTCCATTTGGTGATTCAAATCCTATGGATATTTCAGACGAT
GATCTTCCGTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	57.062	100	0.616
ssb	Latilactobacillus sakei subsp. sakei 23K	57.059	100	0.591
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.261	72.561	0.372
ssb	Glaesserella parasuis strain SC1401	32.62	100	0.372
ssbB	Streptococcus sobrinus strain NIDR 6715-7	52.632	69.512	0.366
ssbB/cilA	Streptococcus mitis NCTC 12261	50.42	72.561	0.366
ssbB/cilA	Streptococcus pneumoniae Rx1	50.42	72.561	0.366
ssbB/cilA	Streptococcus pneumoniae D39	50.42	72.561	0.366
ssbB/cilA	Streptococcus pneumoniae R6	50.42	72.561	0.366
ssbB/cilA	Streptococcus mitis SK321	50.42	72.561	0.366