Detailed information NTG0160722

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: HSISS4_RS08970
• Genome accession: NZ_CP013216
• Coordinates: 1951736..1952128 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: A0AB33ZFB8
• Organism: Streptococcus salivarius strain HSISS4
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1946736..1957128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HSISS4_RS08930 (HSISS4_01739)	dapD	1946809..1947507 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
HSISS4_RS08935 (HSISS4_01740)	-	1947593..1948345 (-)	753	WP_021152620.1	HAD family hydrolase	-
HSISS4_RS08940 (HSISS4_01741)	-	1948462..1949295 (-)	834	WP_021152621.1	methyltransferase domain-containing protein	-
HSISS4_RS08950 (HSISS4_01742)	-	1949716..1949874 (+)	159	WP_002885650.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
HSISS4_RS08955 (HSISS4_01743)	-	1949894..1950061 (+)	168	WP_002885883.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
HSISS4_RS08960 (HSISS4_01744)	-	1950109..1950363 (+)	255	WP_037620444.1	hypothetical protein	-
HSISS4_RS08965 (HSISS4_01745)	tadA	1950448..1950966 (-)	519	WP_021144676.1	tRNA adenosine(34) deaminase TadA	-
HSISS4_RS08970 (HSISS4_01746)	ssbA	1951736..1952128 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
HSISS4_RS08975 (HSISS4_01747)	-	1952357..1952584 (-)	228	WP_003095911.1	sulfurtransferase TusA family protein	-
HSISS4_RS08980 (HSISS4_01748)	-	1952599..1953630 (-)	1032	WP_021144677.1	YeeE/YedE family protein	-
HSISS4_RS08985 (HSISS4_01749)	ytpR	1953768..1954391 (-)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
HSISS4_RS08990 (HSISS4_01750)	-	1954423..1954947 (-)	525	WP_002885713.1	hypothetical protein	-
HSISS4_RS08995 (HSISS4_01751)	-	1954951..1955265 (-)	315	WP_021144678.1	thioredoxin family protein	-
HSISS4_RS09000 (HSISS4_01752)	-	1955262..1955546 (-)	285	WP_003091918.1	DUF4651 domain-containing protein	-
HSISS4_RS09005 (HSISS4_01753)	pepA	1955646..1956713 (+)	1068	WP_021144679.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=160722 HSISS4_RS08970 WP_002885697.1 1951736..1952128(-) (ssbA) [Streptococcus salivarius strain HSISS4]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=160722 HSISS4_RS08970 WP_002885697.1 1951736..1952128(-) (ssbA) [Streptococcus salivarius strain HSISS4]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGTGATAGGTCTTTTAC
ACGTGTCACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGGGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTCAAACCCATTATGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTTTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385