Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | AOY37_RS01180 | Genome accession | NZ_CP013202 |
| Coordinates | 199893..200288 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282447.1 | Uniprot ID | A0AAV3JLT6 |
| Organism | Streptococcus agalactiae strain GBS ST-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 194893..205288
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOY37_RS01145 (AOY37_01145) | proC | 195287..196057 (-) | 771 | WP_001865901.1 | pyrroline-5-carboxylate reductase | - |
| AOY37_RS01150 (AOY37_01150) | pepA | 196127..197194 (-) | 1068 | WP_001281323.1 | glutamyl aminopeptidase | - |
| AOY37_RS01155 (AOY37_01155) | - | 197379..197618 (-) | 240 | WP_000660180.1 | hypothetical protein | - |
| AOY37_RS01160 (AOY37_01160) | - | 197779..198063 (+) | 285 | WP_000791272.1 | DUF4651 domain-containing protein | - |
| AOY37_RS01165 (AOY37_01165) | - | 198060..198383 (+) | 324 | WP_000602781.1 | thioredoxin family protein | - |
| AOY37_RS01170 (AOY37_01170) | ytpR | 198416..199042 (+) | 627 | WP_000578328.1 | YtpR family tRNA-binding protein | - |
| AOY37_RS01175 (AOY37_01175) | - | 199096..199812 (-) | 717 | WP_000186185.1 | class I SAM-dependent methyltransferase | - |
| AOY37_RS01180 (AOY37_01180) | ssbA | 199893..200288 (+) | 396 | WP_000282447.1 | single-stranded DNA-binding protein | Machinery gene |
| AOY37_RS01185 (AOY37_01185) | - | 200412..201056 (+) | 645 | WP_000416612.1 | HAD family hydrolase | - |
| AOY37_RS01190 (AOY37_01190) | - | 201083..202828 (+) | 1746 | WP_000930334.1 | LytS/YhcK type 5TM receptor domain-containing protein | - |
| AOY37_RS01195 (AOY37_01195) | - | 202809..203549 (+) | 741 | WP_000697630.1 | LytR/AlgR family response regulator transcription factor | - |
| AOY37_RS01200 (AOY37_01200) | - | 203719..204174 (+) | 456 | WP_000683316.1 | CidA/LrgA family protein | - |
| AOY37_RS01205 (AOY37_01205) | lrgB | 204176..204904 (+) | 729 | WP_000421726.1 | antiholin-like protein LrgB | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14774.80 Da Isoelectric Point: 7.0189
>NTDB_id=160591 AOY37_RS01180 WP_000282447.1 199893..200288(+) (ssbA) [Streptococcus agalactiae strain GBS ST-1]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=160591 AOY37_RS01180 WP_000282447.1 199893..200288(+) (ssbA) [Streptococcus agalactiae strain GBS ST-1]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTGAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTGAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.916 |
100 |
0.809 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.099 |
100 |
0.771 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
77.099 |
100 |
0.771 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis SK321 |
76.336 |
100 |
0.763 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.526 |
87.023 |
0.527 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.018 |
86.26 |
0.397 |